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Report for CCDS58319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58319.1 Public Homo sapiens 14 FRMD6 24 110 108 CCDS HistoryNCBI Gene:122786Re-query CCDS DB by CCDS ID:58319.1Re-query CCDS DB by GeneID:122786See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000553556.2 ENSP00000452529.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553556.2Link to Ensembl Protein Viewer:ENSP00000452529.1Re-query CCDS DB by Nucleotide ID:ENST00000553556Re-query CCDS DB by Protein ID:ENSP00000452529
Original member Current member NCBI NM_001267047.1 NP_001253976.1 Accepted alive Link to Nucleotide Sequence:NM_001267047.1Link to Protein Sequence:NP_001253976.1Re-query CCDS DB by Nucleotide ID:NM_001267047Re-query CCDS DB by Protein ID:NP_001253976Link to BLAST:NP_001253976.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001253976.1 264 Q96NE9-3 264 100% 0 0

Chromosomal Locations for CCDS 58319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51720105 51720390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51721949 51722080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51725779 51725870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51727745 51728029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGT
CCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGCCCCGGGA
CACGGGGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACC
AGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGG
ACGATGAAATAGAGATGTTGGTTGATGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTCTCTGGAAGT
CAGCCCAGACATGTGCATCTACATCACAGAGGACATGCTCATGTCGCGGAAGCTGAATGGACACTCTGGG
TTGATTGTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAGCTTCGTGGCCAGA
GTACTGATTCTCTTCCACAGACTATATGTCGGAAACCAAAGACCTCCACTGATCGACACAGCTTGAGCCT
CGATGACATCAGACTTTACCAGAAAGACTTCCTGCGCATTGCAGGTCTGTGTCAGGACACTGCTCAGAGT
TACACCTTTGGATGTGGCCATGAACTGGATGAGGAAGGCCTCTATTGCAACAGTTGCTTGGCCCAGCAGT
GCATCAACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATACTTTTCTCTGGATCTCACTCATGA
TGAAGTTCCAGAGTTTGTTGTGTAA

Translation (264 aa):
MDQLEKRSRASGSSAGSMKHKRLSRHSTASHSSSHTSGIEADTKPRDTGPEDSYSSSAIHRKLKTCSSMT
SHGSSHTSGVESGGKDRLEEDLQDDEIEMLVDDPRDLEQMNEESLEVSPDMCIYITEDMLMSRKLNGHSG
LIVKEIGSSTSSSSETVVKLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQKDFLRIAGLCQDTAQS
YTFGCGHELDEEGLYCNSCLAQQCINIQDAFPVKRTSKYFSLDLTHDEVPEFVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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