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Report for CCDS58318.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58318.1 Public Homo sapiens 14 FRMD6 24 110 108 CCDS HistoryNCBI Gene:122786Re-query CCDS DB by CCDS ID:58318.1Re-query CCDS DB by GeneID:122786See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58318.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344768.10 ENSP00000343899.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344768.10Link to Ensembl Protein Viewer:ENSP00000343899.6Re-query CCDS DB by Nucleotide ID:ENST00000344768Re-query CCDS DB by Protein ID:ENSP00000343899
Original member Current member NCBI NM_001267046.2 NP_001253975.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001267046.2Link to Protein Sequence:NP_001253975.1Re-query CCDS DB by Nucleotide ID:NM_001267046Re-query CCDS DB by Protein ID:NP_001253975Link to BLAST:NP_001253975.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001253975.1 622 Q96NE9-1 622 100% 0 0

Chromosomal Locations for CCDS 58318.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 51689837 51689935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51698142 51698232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51701056 51701159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51702512 51702588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51704749 51704935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51708078 51708233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51711531 51711596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51712483 51712551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51715325 51715499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51720055 51720390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51721949 51722080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51725779 51725870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 51727745 51728029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGAACAAATTGAATTTTCATAACAACAGAGTCATGCAAGACCGCCGCAGTGTGTGCATTTTCCTTCCCA
ACGATGAATCTCTGAACATCATCATAAATGTTAAGATTCTGTGTCACCAGTTGCTGGTCCAGGTTTGTGA
CCTGCTCAGGCTAAAGGACTGCCACCTCTTTGGACTCAGTGTTATACAAAATAATGAACATGTGTATATG
GAGTTGTCACAAAAGCTTTACAAATATTGTCCAAAAGAATGGAAGAAAGAGGCCAGCAAGGTACGACAAT
ACGAAGTCACTTGGGGTATCGACCAATTTGGGCCTCCTATGATCATCCACTTCCGTGTGCAGTACTATGT
GGAAAATGGCAGATTGATCAGTGACAGAGCAGCAAGATACTATTATTACTGGCACCTGAGAAAACAAGTT
CTTCATTCTCAGTGTGTGCTCCGAGAGGAGGCCTACTTCCTGCTGGCAGCCTTTGCCCTGCAGGCTGATC
TTGGGAACTTCAAAAGGAATAAGCACTATGGAAAATACTTCGAGCCAGAGGCTTACTTCCCATCTTGGGT
TGTTTCCAAGAGGGGGAAGGACTACATCCTGAAGCACATTCCAAACATGCACAAAGATCAGTTTGCACTA
ACAGCTTCCGAAGCTCATCTTAAATATATCAAAGAGGCTGTCCGACTGGATGACGTCGCTGTTCATTACT
ACAGATTGTATAAGGATAAAAGGGAAATTGAAGCATCGCTGACTCTTGGATTGACCATGAGGGGAATACA
GATTTTTCAGAATTTAGATGAAGAGAAACAATTACTTTATGATTTCCCCTGGACAAATGTTGGAAAATTG
GTGTTTGTGGGTAAGAAATTTGAGATTTTGCCAGATGGCTTGCCTTCTGCCCGGAAGCTCATATACTACA
CGGGGTGCCCCATGCGCTCCAGACACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCTATATGAATCT
GCAGCCTGTCCTGCGCCATATCCGGAAGCTGGAGGAAAACGAAGAGAAGAAGCAGTACCGGGAATCTTAC
ATCAGTGACAACCTGGACCTCGACATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGG
GCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCAT
TGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCAAG
CTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAG
ACCGGCTGGAAGAGGACTTACAGGACGATGAAATAGAGATGTTGGTTGATGACCCCCGGGATCTGGAGCA
GATGAATGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCATCTACATCACAGAGGACATGCTCATGTCG
CGGAAGCTGAATGGACACTCTGGGTTGATTGTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAGAAA
CAGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCTTCCACAGACTATATGTCGGAAACCAAAGACCTC
CACTGATCGACACAGCTTGAGCCTCGATGACATCAGACTTTACCAGAAAGACTTCCTGCGCATTGCAGGT
CTGTGTCAGGACACTGCTCAGAGTTACACCTTTGGATGTGGCCATGAACTGGATGAGGAAGGCCTCTATT
GCAACAGTTGCTTGGCCCAGCAGTGCATCAACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATA
CTTTTCTCTGGATCTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAA

Translation (622 aa):
MNKLNFHNNRVMQDRRSVCIFLPNDESLNIIINVKILCHQLLVQVCDLLRLKDCHLFGLSVIQNNEHVYM
ELSQKLYKYCPKEWKKEASKVRQYEVTWGIDQFGPPMIIHFRVQYYVENGRLISDRAARYYYYWHLRKQV
LHSQCVLREEAYFLLAAFALQADLGNFKRNKHYGKYFEPEAYFPSWVVSKRGKDYILKHIPNMHKDQFAL
TASEAHLKYIKEAVRLDDVAVHYYRLYKDKREIEASLTLGLTMRGIQIFQNLDEEKQLLYDFPWTNVGKL
VFVGKKFEILPDGLPSARKLIYYTGCPMRSRHLLQLLSNSHRLYMNLQPVLRHIRKLEENEEKKQYRESY
ISDNLDLDMDQLEKRSRASGSSAGSMKHKRLSRHSTASHSSSHTSGIEADTKPRDTGPEDSYSSSAIHRK
LKTCSSMTSHGSSHTSGVESGGKDRLEEDLQDDEIEMLVDDPRDLEQMNEESLEVSPDMCIYITEDMLMS
RKLNGHSGLIVKEIGSSTSSSSETVVKLRGQSTDSLPQTICRKPKTSTDRHSLSLDDIRLYQKDFLRIAG
LCQDTAQSYTFGCGHELDEEGLYCNSCLAQQCINIQDAFPVKRTSKYFSLDLTHDEVPEFVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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