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Report for CCDS58181.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58181.1 Public Homo sapiens 11 BCO2 24 110 108 CCDS HistoryNCBI Gene:83875Re-query CCDS DB by CCDS ID:58181.1Re-query CCDS DB by GeneID:83875See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58181.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361053.8 ENSP00000354338.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361053.8Link to Ensembl Protein Viewer:ENSP00000354338.4Re-query CCDS DB by Nucleotide ID:ENST00000361053Re-query CCDS DB by Protein ID:ENSP00000354338
Original member Current member NCBI NM_001256398.3 NP_001243327.2 Accepted alive Link to Nucleotide Sequence:NM_001256398.3Link to Protein Sequence:NP_001243327.2Re-query CCDS DB by Nucleotide ID:NM_001256398Re-query CCDS DB by Protein ID:NP_001243327Link to BLAST:NP_001243327.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243327.2 506 Q9BYV7-5 506 100% 0 0

Chromosomal Locations for CCDS 58181.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112175602 112175689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112179278 112179482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112193474 112193697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112199699 112199827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112200613 112200773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112202023 112202190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112213724 112213861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112214762 112214944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112216220 112216330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112217761 112217874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGTTTTTTCGAGTCTTTCTCCATTTTATCAGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCTGTGA
TGGTGCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAAATACTCCTCAGAAAAAAGCCGTCTTTGGGCA
GTGTCGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT
CGAGTCTGGGGACATTTTCCTAAGTGGCTCAATGGCTCTCTACTTCGAATTGGACCTGGGAAATTCGAGT
TTGGGAAGGATAAGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGG
CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGATACATATAAGGCCAACAGTGCTAAAAACCGAATT
GTGATCTCAGAATTTGGCACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACGTTTCATGTCCA
GGTTTGAGCTGCCTGGTAAAGCTGCAGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGA
CCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAACCTTCT
TACTACCATAGCTTTGGAATGACAAGGAACTATATAATTTTCATTGAACAACCTCTAAAGATGAACCTGT
GGAAAATTGCCACTTCTAAAATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGGGAACCCCAGTGTAA
TACGCGGTTTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTCCAGGGAGATACTACAGCAAACCTTTT
GTTACATTTCATCAAATCAATGCCTTTGAGGACCAGGGCTGTGTTATAATTGATTTGTGCTGTCAAGATA
ATGGAAGAACCCTAGAAGTTTACCAGTTACAGAATCTCAGGAAGGCTGGGGAAGGGCTTGATCAGGTCCA
TAATTCAGCAGCCAAATCTTTCCCTCGAAGGTTTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTGAG
GGAGACAACCTGAGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGGCTGATGGAACGATCTGGT
GCTCTCATGAAAATCTACATCAGGAGGACCTAGAAAAGGAAGGAGGCATTGAATTTCCTCAGATCTACTA
TGATCGATTCAGTGGCAAAAAGTATCATTTCTTTTATGGCTGTGGCTTTCGGCATTTAGTGGGGGATTCT
CTGATCAAGGTTGATGTGGTGAATAAGACACTGAAGGTTTGGAGAGAAGATGGCTTTTATCCCTCAGAAC
CTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAAGATGGTGGGGTTATTCTTTCTGTGGTGATCACTCC
CAACCAGAATGAAAGCAATTTTATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCTGGGCCGAGCAGAG
GTACCTGTGCAGATGCCTTATGGGTTCCATGGTACCTTCATACCCATCTGA

Translation (506 aa):
MFFRVFLHFIRSHSATAVDFLPVMVHRLPVFKRYMGNTPQKKAVFGQCRGLPCVAPLLTTVEEAPRGISA
RVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRI
VISEFGTLALPDPCKNVFERFMSRFELPGKAAGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPS
YYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPF
VTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLNAPE
GDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDS
LIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAE
VPVQMPYGFHGTFIPI


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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