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Report for CCDS58165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58165.1 Public Homo sapiens 11 TMEM126A 24 110 108 CCDS HistoryNCBI Gene:84233Re-query CCDS DB by CCDS ID:58165.1Re-query CCDS DB by GeneID:84233See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58165.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532180.1 ENSP00000434357.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532180.1Link to Ensembl Protein Viewer:ENSP00000434357.1Re-query CCDS DB by Nucleotide ID:ENST00000532180Re-query CCDS DB by Protein ID:ENSP00000434357
Original member Current member EBI ENST00000528105.5 ENSP00000436590.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528105.5Link to Ensembl Protein Viewer:ENSP00000436590.1Re-query CCDS DB by Nucleotide ID:ENST00000528105Re-query CCDS DB by Protein ID:ENSP00000436590
Original member Current member NCBI NM_001244735.2 NP_001231664.1 Accepted alive Link to Nucleotide Sequence:NM_001244735.2Link to Protein Sequence:NP_001231664.1Re-query CCDS DB by Nucleotide ID:NM_001244735Re-query CCDS DB by Protein ID:NP_001231664Link to BLAST:NP_001231664.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231664.1 125 Q9H061-2 125 100% 0 0

Chromosomal Locations for CCDS 58165.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 85654187 85654256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 85655594 85655708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 85656309 85656501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGGCAGGGATACCTTTTCTTACAACAGACTTAACTTACAGATGTTTTGTAAGTTTTCCTTTGAATACAG
GTGATTTGGATTGTGAAACCTGTACCATAACACGGAGTGGACTGACTGGTCTTGTTATTGGTGGTCTATA
CCCTGTTTTCTTGGCTATACCTGTAAATGGTGGTCTAGCAGCCAGGTATCAATCAGCTCTGTTACCACAC
AAAGGGAACATCTTAAGTTACTGGATTAGAACTTCTAAGCCTGTCTTTAGAAAGATGTTATTTCCTATTT
TGCTCCAGACTATGTTTTCAGCATACCTTGGGTCTGAACAATATAAACTACTTATAAAGGCCCTTCAGTT
ATCTGAACCTGGCAAAGAAATTCACTGA

Translation (125 aa):
MAGIPFLTTDLTYRCFVSFPLNTGDLDCETCTITRSGLTGLVIGGLYPVFLAIPVNGGLAARYQSALLPH
KGNILSYWIRTSKPVFRKMLFPILLQTMFSAYLGSEQYKLLIKALQLSEPGKEIH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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