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Report for CCDS58164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58164.1 Public Homo sapiens 11 NARS2 24 110 108 CCDS HistoryNCBI Gene:79731Re-query CCDS DB by CCDS ID:58164.1Re-query CCDS DB by GeneID:79731See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58164.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528850.5 ENSP00000432635.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528850.5Link to Ensembl Protein Viewer:ENSP00000432635.1Re-query CCDS DB by Nucleotide ID:ENST00000528850Re-query CCDS DB by Protein ID:ENSP00000432635
Original member Current member EBI ENST00000695115.1 ENSP00000511705.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695115.1Link to Ensembl Protein Viewer:ENSP00000511705.1Re-query CCDS DB by Nucleotide ID:ENST00000695115Re-query CCDS DB by Protein ID:ENSP00000511705
Original member Current member EBI ENST00000695342.1 ENSP00000511817.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695342.1Link to Ensembl Protein Viewer:ENSP00000511817.1Re-query CCDS DB by Nucleotide ID:ENST00000695342Re-query CCDS DB by Protein ID:ENSP00000511817
Original member Current member EBI ENST00000695343.1 ENSP00000511818.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695343.1Link to Ensembl Protein Viewer:ENSP00000511818.1Re-query CCDS DB by Nucleotide ID:ENST00000695343Re-query CCDS DB by Protein ID:ENSP00000511818
Original member Current member EBI ENST00000695348.1 ENSP00000511823.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695348.1Link to Ensembl Protein Viewer:ENSP00000511823.1Re-query CCDS DB by Nucleotide ID:ENST00000695348Re-query CCDS DB by Protein ID:ENSP00000511823
Original member Current member NCBI NM_001243251.2 NP_001230180.1 Accepted alive Link to Nucleotide Sequence:NM_001243251.2Link to Protein Sequence:NP_001230180.1Re-query CCDS DB by Nucleotide ID:NM_001243251Re-query CCDS DB by Protein ID:NP_001230180Link to BLAST:NP_001230180.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230180.1 250 Q96I59-2 250 100% 0 0

Chromosomal Locations for CCDS 58164.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 78436670 78436814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78441091 78441117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78443661 78443758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78465876 78466013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78469247 78469313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78478438 78478475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78478585 78478683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78493063 78493195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 78528842 78528849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (753 nt):
ATGTCAGGAGCTTTTACTCAAGTGTTTACCTTTGGTCCGACCTTCCGAGCTGAAAATTCTCAGAGCCGGA
GGCACCTGGCAGAGTTTTATATGATAGAAGCAGAGATTTCTTTTGTTGACAGCCTTCAAGATCTTATGCA
GGTTATAGAGGAACTGTTCAAGGCTACAACAATGATGGTTCTCTCAAAATGTCCTGAAGATGTTGAACTC
TGTCACAAATTCATAGCACCTGGCCAAAAGGACAGATTAGAACATATGCTAAAAAACAACTTTTTAATCA
TTTCTTATACTGAAGCAGTGGAGATCTTAAAGCAAGCATCCCAGAACTTCACCTTTACCCCAGAGTGGGG
TGCTGACCTACGGACTGAACATGAAAAGTACCTGGTGAAGCACTGTGGCAACATACCTGTCTTCGTTATT
AATTATCCATTAACACTCAAGCCTTTCTACATGAGGGATAATGAAGATGGCCCTCAGCACACGGTTGCTG
CTGTTGATCTTCTGGTTCCTGGAGTTGGGGAACTCTTTGGAGGAGGCCTCAGAGAAGAACGATACCATTT
CTTAGAGGAGCGCTTAGCCAGATCGGGACTTACAGAAGTCTACCAATGGTATCTGGACCTTCGTCGATTT
GGATCTGTGCCACATGGAGGTTTTGGGATGGGATTTGAACGCTACCTGCAGTGCATCTTGGGTGTTGACA
ATATCAAAGATGTTATCCCTTTCCCAAGGTTTCCTCATTCATGCCTTTTATAG

Translation (250 aa):
MSGAFTQVFTFGPTFRAENSQSRRHLAEFYMIEAEISFVDSLQDLMQVIEELFKATTMMVLSKCPEDVEL
CHKFIAPGQKDRLEHMLKNNFLIISYTEAVEILKQASQNFTFTPEWGADLRTEHEKYLVKHCGNIPVFVI
NYPLTLKPFYMRDNEDGPQHTVAAVDLLVPGVGELFGGGLREERYHFLEERLARSGLTEVYQWYLDLRRF
GSVPHGGFGMGFERYLQCILGVDNIKDVIPFPRFPHSCLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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