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Report for CCDS5807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5807.1 Public Homo sapiens 7 ATP6V1F 24 110 108 CCDS HistoryNCBI Gene:9296Re-query CCDS DB by CCDS ID:5807.1Re-query CCDS DB by GeneID:9296See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5807.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000249289.5 ENSP00000249289.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000249289.5Link to Ensembl Protein Viewer:ENSP00000249289.4Re-query CCDS DB by Nucleotide ID:ENST00000249289Re-query CCDS DB by Protein ID:ENSP00000249289
Original member Current member NCBI NM_004231.4 NP_004222.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004231.4Link to Protein Sequence:NP_004222.2Re-query CCDS DB by Nucleotide ID:NM_004231Re-query CCDS DB by Protein ID:NP_004222Link to BLAST:NP_004222.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004222.2 119 Q16864-1 119 100% 0 0

Chromosomal Locations for CCDS 5807.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 128862905 128863062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 128865377 128865578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGGCGGGGAGGGGTAAGCTCATCGCAGTGATCGGAGACGAGGACACGGTGACTGGTTTCCTGCTGGGCG
GCATAGGGGAGCTTAACAAGAACCGCCATCCCAATTTCCTGGTGGTGGAGAAGGATACAACCATCAATGA
GATCGAAGACACTTTCCGGCAATTTCTAAACCGGGATGACATTGGCATCATCCTCATCAACCAGTACATC
GCAGAGATGGTGCGGCATGCCCTGGACGCCCACCAGCAGTCCATCCCCGCTGTCCTGGAGATCCCCTCCA
AGGAGCACCCATATGACGCCGCCAAGGACTCCATCCTGCGCAGGGCCAGGGGCATGTTCACTGCCGAAGA
CCTGCGCTAG

Translation (119 aa):
MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYI
AEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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