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Report for CCDS5785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5785.1 Public Homo sapiens 7 TAS2R16 24 110 108 CCDS HistoryNCBI Gene:50833Re-query CCDS DB by CCDS ID:5785.1Re-query CCDS DB by GeneID:50833See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5785.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000249284.3 ENSP00000249284.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000249284.3Link to Ensembl Protein Viewer:ENSP00000249284.2Re-query CCDS DB by Nucleotide ID:ENST00000249284Re-query CCDS DB by Protein ID:ENSP00000249284
Original member Current member NCBI NM_016945.3 NP_058641.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016945.3Link to Protein Sequence:NP_058641.1Re-query CCDS DB by Nucleotide ID:NM_016945Re-query CCDS DB by Protein ID:NP_058641Link to BLAST:NP_058641.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058641.1 291 Q9NYV7 291 100% 0 0

Chromosomal Locations for CCDS 5785.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122994759 122995634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGATACCCATCCAACTCACTGTCTTCTTCATGATCATCTATGTGCTTGAGTCCTTGACAATTATTGTGC
AGAGCAGCCTAATTGTTGCAGTGCTGGGCAGAGAATGGCTGCAAGTCAGAAGGCTGATGCCTGTGGACAT
GATTCTCATCAGCCTGGGCATCTCTCGCTTCTGTCTACAGTGGGCATCAATGCTGAACAATTTTTGCTCC
TATTTTAATTTGAATTATGTACTTTGCAACTTAACAATCACCTGGGAATTTTTTAATATCCTTACATTCT
GGTTAAACAGCTTGCTTACCGTGTTCTACTGCATCAAGGTCTCTTCTTTCACCCATCACATCTTTCTCTG
GCTGAGGTGGAGAATTTTGAGGTTGTTTCCCTGGATATTACTGGGTTCTCTGATGATTACTTGTGTAACA
ATCATCCCTTCAGCTATTGGGAATTACATTCAAATTCAGTTACTCACCATGGAGCATCTACCAAGAAACA
GCACTGTAACTGACAAACTTGAAAATTTTCATCAGTATCAGTTCCAGGCTCATACAGTTGCATTGGTTAT
TCCTTTCATCCTGTTCCTGGCCTCCACCATCTTTCTCATGGCATCACTGACCAAGCAGATACAACATCAT
AGCACTGGTCACTGCAATCCAAGCATGAAAGCGCGCTTCACTGCCCTGAGGTCCCTTGCCGTCTTATTTA
TTGTGTTTACCTCTTACTTTCTAACCATACTCATCACCATTATAGGTACTCTATTTGATAAGAGATGTTG
GTTATGGGTCTGGGAAGCTTTTGTCTATGCTTTCATCTTAATGCATTCCACTTCACTGATGCTGAGCAGC
CCTACGTTGAAAAGGATTCTAAAGGGAAAGTGCTAG

Translation (291 aa):
MIPIQLTVFFMIIYVLESLTIIVQSSLIVAVLGREWLQVRRLMPVDMILISLGISRFCLQWASMLNNFCS
YFNLNYVLCNLTITWEFFNILTFWLNSLLTVFYCIKVSSFTHHIFLWLRWRILRLFPWILLGSLMITCVT
IIPSAIGNYIQIQLLTMEHLPRNSTVTDKLENFHQYQFQAHTVALVIPFILFLASTIFLMASLTKQIQHH
STGHCNPSMKARFTALRSLAVLFIVFTSYFLTILITIIGTLFDKRCWLWVWEAFVYAFILMHSTSLMLSS
PTLKRILKGKC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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