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Report for CCDS57532.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57532.1 Public Mus musculus 7 Dyrk1b 23 108 98 CCDS HistoryNCBI Gene:13549Re-query CCDS DB by CCDS ID:57532.1Re-query CCDS DB by GeneID:13549See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57532.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000172761.7 ENSMUSP00000133719.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172761.7Link to Ensembl Protein Viewer:ENSMUSP00000133719.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172761Re-query CCDS DB by Protein ID:ENSMUSP00000133719
Original member NCBI NM_010092.2 NP_034222.1 Updated not alive Link to Nucleotide Sequence:NM_010092.2Link to Protein Sequence:NP_034222.1Re-query CCDS DB by Nucleotide ID:NM_010092Re-query CCDS DB by Protein ID:NP_034222
Current member NCBI NM_010092.3 NP_034222.1 Accepted alive Link to Nucleotide Sequence:NM_010092.3Link to Protein Sequence:NP_034222.1Re-query CCDS DB by Nucleotide ID:NM_010092Re-query CCDS DB by Protein ID:NP_034222Link to BLAST:NP_034222.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034222.1 589 Q9Z188-2 589 100% 0 0

Chromosomal Locations for CCDS 57532.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28181610 28181672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28182361 28182480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28182579 28182767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28183064 28183211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28184241 28184527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28185068 28185214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28185296 28185436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28185834 28186029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28186362 28186468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28186552 28186923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGGCCGTCCCACCAGGCCATGGTCCTTTCTCTGGCTTTCCGGGGCCCCAGGAACACACACAGGTACTAC
CTGATGTGCGGCTCCTGCCCCGGAGACTGCCCCTGGCCTTCCGGGATGCGGCCTCAGCCCCGCTGCGCAA
GCTCTCGGTGGACCTCATCAAGACCTACAAGCACATCAATGAGGTATACTATGCGAAGAAGAAGCGGCGG
GCCCAACAGGCGCCACCCCAGGACTCGAGCACCAAAAAGGAGAAGAAGGTCCTGAACCACGGTTATGATG
ACGACAACCACGACTACATTGTGCGCAGTGGCGAGCGCTGGCTAGAGCGCTATGAGATTGACTCTCTTAT
TGGCAAAGGCTCCTTTGGCCAGGTGGTGAAAGCCTATGATCACCAGACTCAGGAGCTGGTGGCCATCAAG
ATCATCAAGAACAAAAAGGCCTTCCTGAACCAGGCACAGATTGAGCTACGGCTGTTGGAGCTGATGAACC
AGCATGATACAGAGATGAAGTACTACATAGTACACCTTAAGCGGCACTTCATGTTCCGGAATCACCTGTG
CCTGGTGTTTGAGCTGCTGTCCTACAACCTGTACGACCTCCTCCGCAACACACACTTTCGGGGTGTCTCA
CTGAACCTGACGAGGAAGCTGGCACAGCAGCTCTGCACAGCTCTGCTCTTTCTGGCCACCCCCGAGCTCA
GCATCATCCACTGCGACCTCAAGCCTGAGAACATCCTGCTCTGCAACCCCAAGCGCAGTGCCATCAAGAT
CGTGGACTTCGGCAGTTCCTGCCAGCTTGGCCAGCGGATCTACCAGTATATCCAGAGCCGCTTCTACCGC
TCACCCGAGGTGCTCCTGGGTACACCCTATGACCTGGCCATTGACATGTGGTCCCTGGGCTGCATCCTCG
TGGAGATGCACACCGGAGAGCCCCTCTTCAGTGGCTCTAATGAGGTGGACCAGATGAGCCGTATTGTGGA
GGTGTTGGGCATCCCTCCCGCACCCATGCTGGAACAGGCACCCAAGGCTCGAAAGTACTTTGAGCGGCTG
CCTGGGGGTGGCTGGACCCTACGAAGGACAAAGGAACTCAGGAAGGACCTGGTGCTGCGCATGCTGGAAT
ATGAGCCCGCCGCCCGCATCAGCCCTCTGGGCGCTCTGCAGCATGGCTTCTTCCGCCGCACGGCCGACGA
GGCCACCAACACGGGCCCGGCAGGCAGCAGTGCCTCCACCTCGCCGGCGCCCCTTGACACCTGCCCCTCC
TCTAGCACCGCCAGCTCCATCTCCAGCTCTGGAGGTTCCAGTGGCTCCTCCAACGACAACAGAGCCTACC
GATACAGCAACCGATATTGTGGGGGCCCAGGGCCCCCCATCACTGACTGTGAGATGAACAGCCCCCAGGT
CCTACCCTCCCAGCCTCTGCGCCCCTGGGCAGGGGGTGATGTGCCCCACAAGACACATCAAGCCCCTATC
TCTGCCTCAACATTGCCGGGGACTGGGGCTCAGTTACCCCCATTGCCCCGTTGCCTTGGACGACCCCCAT
CACCAACATCACCACCACCCCCAGAGTTGATGGATGTGAGCCTGGTGGGCAGCCCTCCAGACTGCTCTCC
ACCTCCTCCAGCACCTGCCCCCCAGCACCCGGCTGCCTCAGCCCTCCGGACTCGGATGACAGGAGGTCGA
CCACCTCTCCCACCCCCTGATGACCCTGCCACTCTGGGGCCTCGCCTGGGTCTCCATGGTGTACCCCAGA
GCACAGCAGCCAGCTCATGA

Translation (589 aa):
MAVPPGHGPFSGFPGPQEHTQVLPDVRLLPRRLPLAFRDAASAPLRKLSVDLIKTYKHINEVYYAKKKRR
AQQAPPQDSSTKKEKKVLNHGYDDDNHDYIVRSGERWLERYEIDSLIGKGSFGQVVKAYDHQTQELVAIK
IIKNKKAFLNQAQIELRLLELMNQHDTEMKYYIVHLKRHFMFRNHLCLVFELLSYNLYDLLRNTHFRGVS
LNLTRKLAQQLCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYR
SPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMSRIVEVLGIPPAPMLEQAPKARKYFERL
PGGGWTLRRTKELRKDLVLRMLEYEPAARISPLGALQHGFFRRTADEATNTGPAGSSASTSPAPLDTCPS
SSTASSISSSGGSSGSSNDNRAYRYSNRYCGGPGPPITDCEMNSPQVLPSQPLRPWAGGDVPHKTHQAPI
SASTLPGTGAQLPPLPRCLGRPPSPTSPPPPELMDVSLVGSPPDCSPPPPAPAPQHPAASALRTRMTGGR
PPLPPPDDPATLGPRLGLHGVPQSTAASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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