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Report for CCDS57470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57470.1 Public Mus musculus 7 Prkcg 23 108 98 CCDS HistoryNCBI Gene:18752Re-query CCDS DB by CCDS ID:57470.1Re-query CCDS DB by GeneID:18752See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57470.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100301.10 ENSMUSP00000097874.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100301.10Link to Ensembl Protein Viewer:ENSMUSP00000097874.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100301Re-query CCDS DB by Protein ID:ENSMUSP00000097874
Original member NCBI NM_011102.4 NP_035232.1 Updated not alive Link to Nucleotide Sequence:NM_011102.4Link to Protein Sequence:NP_035232.1Re-query CCDS DB by Nucleotide ID:NM_011102Re-query CCDS DB by Protein ID:NP_035232
Current member NCBI NM_011102.5 NP_035232.1 Accepted alive Link to Nucleotide Sequence:NM_011102.5Link to Protein Sequence:NP_035232.1Re-query CCDS DB by Nucleotide ID:NM_011102Re-query CCDS DB by Protein ID:NP_035232Link to BLAST:NP_035232.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035232.1 697 P63318 697 100% 0 0

Chromosomal Locations for CCDS 57470.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 3303790 3303959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3304306 3304337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3305344 3305426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3310564 3310675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3310836 3310967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3312389 3312545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3313698 3313832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3314133 3314220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3314512 3314541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3318860 3319012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3319531 3319719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3322340 3322431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3322517 3322579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3323456 3323594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3327416 3327496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3329035 3329142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3329828 3329968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 3330146 3330334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2094 nt):
ATGGCGGGTCTGGGCCCTGGCGGAGGCGACTCAGAGGGGGGACCCCGACCCCTGTTTTGCAGAAAGGGGG
CGCTGAGGCAGAAGGTGGTCCACGAGGTGAAGAGCCACAAGTTCACCGCTCGTTTCTTCAAGCAGCCAAC
CTTCTGCAGTCACTGTACCGACTTCATCTGGGGCATTGGAAAGCAGGGCCTGCAATGTCAAGTCTGTAGC
TTTGTGGTTCACCGCCGATGCCACGAATTTGTGACCTTCGAGTGTCCAGGCGCTGGAAAGGGCCCCCAGA
CGGACGACCCTCGCAACAAGCACAAGTTCCGTCTGCACAGCTACAGCAGTCCCACCTTCTGCGACCACTG
TGGCTCCCTCCTTTACGGGCTGGTGCACCAGGGCATGAAATGTTCCTGTTGCGAGATGAATGTGCACCGG
CGCTGTGTGCGCAGCGTGCCCTCCCTTTGCGGTGTGGACCACACAGAGCGCCGTGGACGTCTGCAACTGG
AAATCCGGGCTCCTACGTCGGATGAGATCCATATTACTGTTGGCGAGGCCCGGAACCTCATTCCTATGGA
CCCCAATGGCCTGTCTGATCCCTACGTGAAACTGAAGCTGATCCCGGACCCTCGGAACCTGACAAAACAG
AAGACAAAGACCGTGAAAGCCACACTGAATCCCGTGTGGAACGAGACCTTCGTGTTCAACCTGAAGCCAG
GGGATGTAGAGCGCCGGCTCAGTGTGGAGGTGTGGGATTGGGATAGGACATCCCGAAATGACTTCATGGG
TGCCATGTCCTTTGGTGTCTCAGAGCTACTCAAGGCCCCTGTGGATGGATGGTACAAGTTACTGAACCAG
GAGGAGGGCGAATATTACAATGTACCGGTGGCCGATGCTGACAACTGCAGCCTCCTCCAGAAGTTTGAGG
CCTGCAATTACCCCTTGGAATTGTATGAGAGAGTGCGGATGGGCCCCTCTTCCTCCCCCATCCCTTCTCC
ATCCCCCAGTCCTACGGACTCCAAGCGATGCTTCTTTGGTGCCAGCCCAGGACGCCTGCATATCTCTGAC
TTCAGCTTCCTCATGGTTCTAGGGAAAGGCAGTTTTGGGAAGGTAATGCTGGCAGAGCGCAGAGGCTCCG
ACGAACTCTATGCCATCAAGATACTGAAGAAAGACGTCATCGTCCAGGATGACGATGTAGACTGCACCCT
CGTAGAGAAGCGTGTCCTGGCATTGGGAGGCCGAGGTCCTGGAGGCCGGCCACACTTTCTCACGCAGCTT
CACTCCACCTTTCAGACTCCGGACCGCCTGTATTTTGTGATGGAGTATGTCACTGGGGGCGATTTAATGT
ACCACATCCAGCAACTGGGCAAGTTTAAGGAGCCTCATGCAGCATTCTACGCTGCGGAAATCGCCATAGG
CCTCTTCTTCCTTCACAACCAGGGCATCATCTACAGGGACCTCAAGTTGGATAATGTGATGCTGGATGCT
GAAGGACACATCAAGATCACAGACTTTGGCATGTGTAAAGAGAATGTCTTCCCTGGGTCCACAACCCGCA
CCTTCTGTGGCACCCCAGACTACATAGCACCTGAGATCATTGCCTATCAGCCCTACGGGAAGTCTGTCGA
CTGGTGGTCTTTTGGGGTCCTGCTGTATGAGATGTTGGCAGGACAGCCACCCTTTGATGGGGAAGATGAG
GAAGAGTTGTTTCAAGCCATCATGGAACAAACTGTCACCTATCCCAAGTCACTTTCCCGGGAAGCTGTGG
CCATCTGCAAAGGGTTCCTGACCAAGCACCCAGGAAAACGCCTGGGCTCAGGGCCAGATGGGGAACCCAC
CATCCGGGCTCATGGCTTTTTCCGTTGGATCGATTGGGAGAGGTTGGAGAGACTGGAAATTGCACCTCCT
TTCAGACCACGTCCGTGTGGCCGCAGTGGCGAAAACTTTGACAAGTTCTTCACGCGGGCAGCGCCAGCAC
TGACCCCGCCAGACCGCTTGGTTCTAGCCAGCATCGACCAAGCTGATTTCCAGGGCTTTACTTATGTGAA
CCCGGACTTCGTGCACCCAGATGCCCGCAGCCCCACAAGCCCTGTGCCCGTGCCTGTCATGTAA

Translation (697 aa):
MAGLGPGGGDSEGGPRPLFCRKGALRQKVVHEVKSHKFTARFFKQPTFCSHCTDFIWGIGKQGLQCQVCS
FVVHRRCHEFVTFECPGAGKGPQTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHR
RCVRSVPSLCGVDHTERRGRLQLEIRAPTSDEIHITVGEARNLIPMDPNGLSDPYVKLKLIPDPRNLTKQ
KTKTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTSRNDFMGAMSFGVSELLKAPVDGWYKLLNQ
EEGEYYNVPVADADNCSLLQKFEACNYPLELYERVRMGPSSSPIPSPSPSPTDSKRCFFGASPGRLHISD
FSFLMVLGKGSFGKVMLAERRGSDELYAIKILKKDVIVQDDDVDCTLVEKRVLALGGRGPGGRPHFLTQL
HSTFQTPDRLYFVMEYVTGGDLMYHIQQLGKFKEPHAAFYAAEIAIGLFFLHNQGIIYRDLKLDNVMLDA
EGHIKITDFGMCKENVFPGSTTRTFCGTPDYIAPEIIAYQPYGKSVDWWSFGVLLYEMLAGQPPFDGEDE
EELFQAIMEQTVTYPKSLSREAVAICKGFLTKHPGKRLGSGPDGEPTIRAHGFFRWIDWERLERLEIAPP
FRPRPCGRSGENFDKFFTRAAPALTPPDRLVLASIDQADFQGFTYVNPDFVHPDARSPTSPVPVPVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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