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Report for CCDS56225.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56225.1 Public Homo sapiens 22 ZNRF3 24 110 108 CCDS HistoryNCBI Gene:84133Re-query CCDS DB by CCDS ID:56225.1Re-query CCDS DB by GeneID:84133See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56225.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544604.7 ENSP00000443824.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000544604.7Link to Ensembl Protein Viewer:ENSP00000443824.2Re-query CCDS DB by Nucleotide ID:ENST00000544604Re-query CCDS DB by Protein ID:ENSP00000443824
Original member Current member NCBI NM_001206998.2 NP_001193927.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001206998.2Link to Protein Sequence:NP_001193927.1Re-query CCDS DB by Nucleotide ID:NM_001206998Re-query CCDS DB by Protein ID:NP_001193927Link to BLAST:NP_001193927.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193927.1 936 Q9ULT6-1 936 100% 0 0

Chromosomal Locations for CCDS 56225.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 28883767 28884066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 28987076 28987201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29042495 29042569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29043299 29043430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29044780 29044890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29046716 29046883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29048389 29048491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29049197 29050948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 29053579 29053622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2811 nt):
ATGAGGCCGCGCTCGGGCGGGCGCCCAGGGGCCACGGGCCGCCGCCGCCGCCGCCTGCGCCGCCGCCCCC
GCGGCCTCCGGTGCAGCCGCCTGCCGCCGCCGCCGCCGCTGCCGCTGCTGCTCGGGCTGCTGCTGGCGGC
CGCGGGGCCCGGCGCGGCGCGGGCCAAGGAGACGGCGTTCGTGGAGGTGGTGCTGTTCGAGTCGAGCCCA
AGCGGCGATTACACCACCTACACCACCGGCCTCACGGGCCGCTTCTCGCGGGCCGGGGCCACGCTCAGCG
CCGAGGGCGAGATCGTGCAGATGCACCCACTGGGCCTATGTAATAACAATGACGAAGAGGACTTGTATGA
ATATGGCTGGGTAGGAGTGGTGAAGCTGGAACAGCCAGAATTGGACCCGAAACCATGCCTCACTGTCCTA
GGCAAGGCCAAGCGAGCAGTACAGCGGGGAGCTACTGCAGTCATCTTTGATGTGTCTGAAAACCCAGAAG
CTATTGATCAGCTGAACCAGGGCTCTGAAGACCCGCTCAAGAGGCCGGTGGTGTATGTGAAGGGTGCAGA
TGCCATTAAGCTGATGAACATCGTCAACAAGCAGAAAGTGGCTCGAGCAAGGATCCAGCACCGCCCTCCT
CGACAACCCACTGAATACTTTGACATGGGGATTTTCCTGGCTTTCTTCGTCGTGGTCTCCTTGGTCTGCC
TCATCCTCCTTGTCAAAATCAAGCTGAAGCAGCGACGCAGTCAGAATTCCATGAACAGGCTGGCTGTGCA
GGCTCTAGAGAAGATGGAAACCAGAAAGTTCAACTCCAAGAGCAAGGGGCGCCGGGAGGGGAGCTGTGGG
GCCCTGGACACACTCAGCAGCAGCTCCACGTCCGACTGTGCCATCTGTCTGGAGAAGTACATTGATGGAG
AGGAGCTGCGGGTCATCCCCTGTACTCACCGGTTTCACAGGAAGTGCGTGGACCCCTGGCTGCTGCAGCA
CCACACCTGCCCCCACTGTCGGCACAACATCATAGAACAAAAGGGAAACCCAAGCGCGGTGTGTGTGGAG
ACCAGCAACCTCTCACGTGGTCGGCAGCAGAGGGTGACCCTGCCGGTGCATTACCCCGGCCGCGTGCACA
GGACCAACGCCATCCCAGCCTACCCTACGAGGACAAGCATGGACTCCCACGGCAACCCCGTCACCTTGCT
GACCATGGACCGGCACGGGGAGCAGAGCCTCTATTCCCCGCAGACCCCCGCCTACATCCGCAGCTACCCA
CCCCTCCACCTGGACCACAGCCTGGCCGCTCACCGCTGCGGCCTGGAGCACCGGGCCTACTCCCCAGCCC
ACCCCTTCCGCAGGCCCAAGTTGAGTGGCCGCAGCTTCTCCAAGGCAGCTTGCTTCTCCCAGTATGAGAC
CATGTACCAGCACTACTACTTCCAGGGCCTCAGCTACCCGGAGCAGGAGGGGCAGTCCCCACCTAGCCTC
GCACCCCGGGGCCCGGCCCGTGCCTTTCCTCCGAGCGGCAGTGGCAGCCTGCTCTTCCCCACCGTGGTGC
ACGTGGCCCCGCCCTCCCACCTGGAGAGCGGCAGCACGTCCAGCTTCAGCTGCTATCACGGCCACCGCTC
GGTGTGCAGTGGCTACCTGGCCGACTGCCCAGGCAGCGACAGCAGCAGCAGCAGCAGCTCCGGCCAGTGC
CACTGTTCCTCCAGTGACTCTGTGGTAGACTGCACTGAGGTCAGCAACCAGGGCGTGTACGGGAGCTGCT
CCACCTTCCGCAGCTCCCTCAGCAGCGACTATGACCCCTTCATCTACCGCAGCCGGAGCCCCTGTCGTGC
CAGTGAGGCGGGGGGCTCGGGCAGCTCGGGCCGGGGACCTGCCCTGTGCTTCGAGGGCTCCCCGCCTCCC
GAGGAGCTCCCGGCGGTGCACAGTCATGGTGCTGGGCGGGGCGAGCCTTGGCCGGGCCCTGCCTCTCCCT
CGGGGGATCAGGTGTCCACCTGCAGCCTGGAGATGAACTACAGCAGCAACTCCTCCCTGGAGCACAGGGG
GCCCAATAGCTCTACCTCAGAAGTGGGGCTCGAGGCTTCTCCTGGGGCCGCCCCTGACCTCAGGAGGACC
TGGAAGGGGGGCCACGAGTTGCCGTCGTGTGCCTGCTGCTGCGAGCCCCAGCCCTCCCCAGCCGGGCCTA
GCGCCGGAGCAGCTGGCAGCAGCACCTTGTTCCTGGGGCCCCACCTCTACGAGGGCTCTGGCCCGGCGGG
TGGGGAGCCCCAGTCAGGAAGCTCCCAGGGCTTGTACGGCCTTCACCCCGACCATTTGCCCAGGACAGAT
GGGGTGAAATACGAGGGTCTGCCCTGCTGCTTCTATGAAGAGAAGCAGGTGGCCCGCGGGGGCGGAGGGG
GCAGCGGCTGCTACACTGAGGACTACTCGGTGAGTGTGCAGTACACGCTCACCGAGGAACCACCGCCCGG
CTGCTACCCCGGGGCCCGGGACCTGAGCCAGCGCATCCCCATCATTCCAGAGGATGTGGACTGTGATCTG
GGCCTGCCCTCGGACTGCCAAGGGACCCACAGCCTCGGCTCCTGGGGTGGGACGCGAGGCCCGGATACCC
CACGGCCCCACAGGGGCCTGGGAGCAACCCGGGAAGAGGAGCGGGCTCTGTGCTGCCAGGCTAGGGCCCT
ACTGCGGCCTGGCTGCCCTCCGGAGGAGGCGGGTGCTGTCAGGGCCAACTTCCCTAGTGCCCTCCAGGAC
ACTCAGGAGTCCAGCACCACTGCCACTGAGGCTGCAGGACCGAGATCTCACTCAGCAGACAGCAGCAGCC
CGGGAGCCTGA

Translation (936 aa):
MRPRSGGRPGATGRRRRRLRRRPRGLRCSRLPPPPPLPLLLGLLLAAAGPGAARAKETAFVEVVLFESSP
SGDYTTYTTGLTGRFSRAGATLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVL
GKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPP
RQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG
ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVE
TSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMDRHGEQSLYSPQTPAYIRSYP
PLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAACFSQYETMYQHYYFQGLSYPEQEGQSPPSL
APRGPARAFPPSGSGSLLFPTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQC
HCSSSDSVVDCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPP
EELPAVHSHGAGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT
WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYGLHPDHLPRTD
GVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYPGARDLSQRIPIIPEDVDCDL
GLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERALCCQARALLRPGCPPEEAGAVRANFPSALQD
TQESSTTATEAAGPRSHSADSSSPGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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