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Report for CCDS56105.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56105.1 Public Homo sapiens 19 ZNF835 24 110 108 CCDS HistoryNCBI Gene:90485Re-query CCDS DB by CCDS ID:56105.1Re-query CCDS DB by GeneID:90485See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56105.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537055.4 ENSP00000444747.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000537055.4Link to Ensembl Protein Viewer:ENSP00000444747.1Re-query CCDS DB by Nucleotide ID:ENST00000537055Re-query CCDS DB by Protein ID:ENSP00000444747
Original member Current member NCBI NM_001005850.3 NP_001005850.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005850.3Link to Protein Sequence:NP_001005850.2Re-query CCDS DB by Nucleotide ID:NM_001005850Re-query CCDS DB by Protein ID:NP_001005850Link to BLAST:NP_001005850.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005850.2 537 Q9Y2P0 537 100% 0 0

Chromosomal Locations for CCDS 56105.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 56663585 56665198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1614 nt):
ATGGAGGGACTCTTGAGCGTCGCCCTCCAGGGCGCAGAGTTGGAAGGAAACTGGAAACACGAGGGCCAGG
TTGAGGACCTGCAGGAAAACCAGGAAAGCTGTCCAGAGCCAGAGGCCGTGGCCTGCAAGGGAGACCCTGC
TGGGGACAGCATGCAGGAACGCGATGAATTCAGCCGAATCCCAAGAACCATATCGAGCCCTGCTGCTACC
CAAGCCAGTGTCCCCGACGACAGCAGTTCCCGGAGGTGCAGCGCGCCTGGGGAGAGCCCGAAGGAGAGGC
ATCCTGACAGCCGCCAGCGGGAGAGAGGTGGAGGCCCCAAGAAGCCGTGGAAATGCGGGGACTGCGGGAA
GGCCTTCAGCTACTGTTCAGCGTTCATCTTACACCAGAGAATCCACACCGGGGAGAAGCCATTTGCGTGC
CCCGAGTGCGGCAAGGCCTTCAGCCAGAGCGTGCACCTGACCCTGCACCAGCGCACGCACACGGGCGAGA
AGCCCTACGCCTGCCACGAGTGCGGCAAGGCCTTCAGCCAGGGCTCGTACCTGGCGTCCCACTGGCGCAC
GCACACGGGCGAGAAGCCGCACCGCTGCGCCGACTGCGGCAAGGCCTTCACGCGCGTCACGCACCTGACC
CAGCACCGGCGCGTGCACACGGGCGAGCGGCCCTACGCGTGCGCCCAGTGCGCCAAGGCGTTCCGCAACC
GCTCGTCCCTGATAGAGCACCAGCGCATCCACACCGGTGAGAAGCCCTACGAGTGCTCCGCGTGCGCCAA
GGCCTTCCGCTTCTCCTCAGCGCTCATCCGCCACCAGCGCATCCACACGGAGGAGAAGCCCTACCGCTGC
GGCCAGTGCGCCAAGGCCTTCGCGCAGATCGCGCACCTGACCCAGCACCGGCGCGTGCACACGGGCGAGA
AGCCCTACACGTGCCAGGACTGCGGCGCGCTCTTCAGCCAGAGCGCCTCTCTGGCCGAGCACCGGCGCAT
CCACACAGGCGAGAAGCCCTACGCGTGCGGCCAGTGCGCCAAGGCCTTCACCCAGGTGTCGCACCTGACG
CAGCACCAGCGCACGCACACCGGAGAGCGGCCTTACCCCTGCCACGACTGCGGCAAGCGCTTCAGCAACC
GCTCCCACCTCCTCCAGCACCGCCTCGTGCACACCGGTGAGCGGCCCTACAGGTGCCTGCAATGCGGGGC
CGCCTTCAGCCACGTGTCCTCGCTTATAGAGCACCAGAAGATCCACACCGGAGAGCGGCCCTACAAGTGC
GGCGAGTGCGGCAAAGCTTTCAGCCAGGGCTCCTCGCTCGCCCTGCACCAGCGCACGCACACGGGCGAGC
GGCCCTACACCTGCCCCGAGTGCGGCAAGGCCTTCAGCAACCGCTCCTACCTGATCCAGCACCACATCGT
GCACACCGGGGAGAAGCCCTACGAGTGCAGCGGCTGCGGGAAGGCCTTCAGCTTCTCCTCCGCGCTCATC
CGACACCAGAGGACGCATGCAGACAGTTCGGGACGCCTTTGCCCAGCTCCCACGCCTGACTCAACACCTG
GGCTCTCACAGGGAGGAGAAACCTGTCAACAGGGGTGCCCTGGCAGAAACCCGCGTGGACCAGCAGAAGA
TTAA

Translation (537 aa):
MEGLLSVALQGAELEGNWKHEGQVEDLQENQESCPEPEAVACKGDPAGDSMQERDEFSRIPRTISSPAAT
QASVPDDSSSRRCSAPGESPKERHPDSRQRERGGGPKKPWKCGDCGKAFSYCSAFILHQRIHTGEKPFAC
PECGKAFSQSVHLTLHQRTHTGEKPYACHECGKAFSQGSYLASHWRTHTGEKPHRCADCGKAFTRVTHLT
QHRRVHTGERPYACAQCAKAFRNRSSLIEHQRIHTGEKPYECSACAKAFRFSSALIRHQRIHTEEKPYRC
GQCAKAFAQIAHLTQHRRVHTGEKPYTCQDCGALFSQSASLAEHRRIHTGEKPYACGQCAKAFTQVSHLT
QHQRTHTGERPYPCHDCGKRFSNRSHLLQHRLVHTGERPYRCLQCGAAFSHVSSLIEHQKIHTGERPYKC
GECGKAFSQGSSLALHQRTHTGERPYTCPECGKAFSNRSYLIQHHIVHTGEKPYECSGCGKAFSFSSALI
RHQRTHADSSGRLCPAPTPDSTPGLSQGGETCQQGCPGRNPRGPAED


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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