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Report for CCDS56068.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56068.1 Public Homo sapiens 18 ELP2 24 110 108 CCDS HistoryNCBI Gene:55250Re-query CCDS DB by CCDS ID:56068.1Re-query CCDS DB by GeneID:55250See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56068.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542824.5 ENSP00000443800.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542824.5Link to Ensembl Protein Viewer:ENSP00000443800.1Re-query CCDS DB by Nucleotide ID:ENST00000542824Re-query CCDS DB by Protein ID:ENSP00000443800
Original member Current member NCBI NM_001242878.3 NP_001229807.1 Accepted alive Link to Nucleotide Sequence:NM_001242878.3Link to Protein Sequence:NP_001229807.1Re-query CCDS DB by Nucleotide ID:NM_001242878Re-query CCDS DB by Protein ID:NP_001229807Link to BLAST:NP_001229807.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229807.1 756 Q6IA86-2 756 100% 0 0

Chromosomal Locations for CCDS 56068.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 36129934 36130071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36133238 36133316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36136307 36136377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36138270 36138426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36141137 36141201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36142281 36142347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36142826 36142966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36144939 36145034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36145948 36146048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36154850 36154999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36156466 36156654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36158835 36158904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36159735 36159830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36159958 36160015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36160932 36161004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36164475 36164667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36167101 36167222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36170063 36170196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36171047 36171160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36174485 36174641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2271 nt):
ATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACT
GGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATGACCCCCTGAA
AAGGGTTGTTGTTACCAACTTGAATGGTCACACCGCCCGAGTCAATTGCATACAGTGGATTTGTAAACAG
GATGGCTCCCCTTCTACTGAATTAGTTTCTGGAGGATCTGATAATCAAGTGATTCACTGGGAAATAGAGG
ATAATCAGCTTTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACCTGTTTATGCGGTGCATGCTGTTTA
CCAGAGGAGGACATCAGATCCTGCATTATGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA
CTCTGGTCTAAAAAGGGTCCAGAAGTACCAATATTAGCATGTGGCAATGATGATTGCAGAATTCACATAT
TTGCTCAACAAAATGATCAGTTTCAGAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGT
GGAATGGGCAGCCTTTGGTAGAGATCTTTTCCTAGCAAGCTGTTCACAAGATTGCCTGATAAGAATATGG
AAGCTGTATATAAAGTCAACATCTTTAGAAACTCAGGATGACGATAACATAAGACTGAAAGAAAATACTT
TTACCATAGAAAATGAAAGTGTTAAAATAGCATTTGCTGTTACTCTGGAGACAGTGCTAGCCGGTCATGA
AAACTGGGTAAATGCAGTTCACTGGCAACCTGTGTTTTACAAAGATGGTGTCCTACAGCAGCCAGTGAGA
TTATTATCTGCTTCCATGGATAAAACCATGATTCTCTGGGCTCCAGATGAAGAGTCAGGAGTTTGGCTAG
AACAGAGAGAGTGGACTCCAGAGATTGTCATTTCAGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGA
TCCAGAAGGAGAATTTATTATCACTGTTGGTACTGATCAGACAACTAGACTTTTTGCTCCATGGAAGAGA
AAAGACCAATCACAGGTGACTTGGCATGAAATTGCAAGGCCTCAGATACATGGGTATGACCTGAAATGTT
TGGCAATGATTAATCGGTTTCAGTTTGTATCTGGAGCAGATGAAAAAGTTCTTCGGGTTTTTTCTGCACC
TCGGAATTTTGTGGAAAATTTTTGTGCCATTACAGGACAATCACTGAATCATGTGCTCTGTAATCAAGAT
AGTGATCTTCCAGAAGGAGCCACTGTCCCTGCATTGGGATTATCAAATAAAGCTGTCTTTCAGGGAGATA
TAGCTTCTCAGCCTTCTGATGAAGAGGAGCTGTTAACTAGTACTGGTTTTGAGTATCAGCAGGTGGCCTT
TCAGCCCTCCATACTTACTGAGCCTCCCACTGAGGATCATCTTCTGCAGAATACTTTGTGGCCTGAAGTT
CAAAAACTATATGGGCACGGTTATGAAATATTTTGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCT
CAGCTTGTAAGGCAGCTAAGAAAGAGCATGCAGCTATCATTCTTTGGAACACTACATCTTGGAAACAGGT
GCAGAATTTAGTTTTCCACAGTTTGACAGTCACGCAGATGGCCTTCTCACCTAATGAGAAGTTCTTACTA
GCTGTTTCCAGAGATCGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGAGCCAG
TTTTTAGTCTTTTTGCCTTCACCAACAAAATTACTTCTGTGCACAGTAGAATTATTTGGTCTTGTGATTG
GAGTCCTGACAGCAAGTATTTCTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTGGGGTGAGTGCGAC
TCCACTGATGACTGTATTGAGCACAACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGTGGGGCTGTGA
CAGCTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGG
AAAGATTTGCTTATATACCTGGAAAAAGACTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTA
GAAACAAGTCAAAGCCAAAGTCATACACTGGCTATCAGAAAATTATGCTGGAAGAATTGCAGTGGAAAAA
CTGAACAGAAGGAAGCAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATCACACTGTGAA
GATACACAGAGTCAATAAATGTGCACTGTAA

Translation (756 aa):
MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNCIQWICKQ
DGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVR
LWSKKGPEVPILACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIW
KLYIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENWVNAVHWQPVFYKDGVLQQPVR
LLSASMDKTMILWAPDEESGVWLEQREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKR
KDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQD
SDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEV
QKLYGHGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLL
AVSRDRTWSLWKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECD
STDDCIEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCV
ETSQSQSHTLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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