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Report for CCDS56065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56065.1 Public Homo sapiens 18 ELP2 24 110 108 CCDS HistoryNCBI Gene:55250Re-query CCDS DB by CCDS ID:56065.1Re-query CCDS DB by GeneID:55250See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442325.6 ENSP00000414851.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442325.6Link to Ensembl Protein Viewer:ENSP00000414851.2Re-query CCDS DB by Nucleotide ID:ENST00000442325Re-query CCDS DB by Protein ID:ENSP00000414851
Original member Current member NCBI NM_001242875.3 NP_001229804.1 Accepted alive Link to Nucleotide Sequence:NM_001242875.3Link to Protein Sequence:NP_001229804.1Re-query CCDS DB by Nucleotide ID:NM_001242875Re-query CCDS DB by Protein ID:NP_001229804Link to BLAST:NP_001229804.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229804.1 891 Q6IA86-6 891 100% 0 0

Chromosomal Locations for CCDS 56065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 36129934 36130071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36133238 36133316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36136307 36136377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36138270 36138426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36138795 36138872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36139419 36139613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36141137 36141201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36142281 36142347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36142826 36142966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36144939 36145034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36145948 36146048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36146250 36146381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36154850 36154999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36156466 36156654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36158835 36158904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36159735 36159830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36159958 36160015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36160932 36161004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36164475 36164667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36167101 36167222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36170063 36170196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36171047 36171160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 36174485 36174641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2676 nt):
ATGGTGGCACCCGTGCTGGAGACTTCTCACGTGTTTTGCTGCCCAAACCGGGTGCGGGGAGTCCTGAACT
GGAGCTCTGGGCCCAGAGGACTTCTGGCCTTTGGCACGTCCTGCTCCGTGGTGCTCTATGACCCCCTGAA
AAGGGTTGTTGTTACCAACTTGAATGGTCACACCGCCCGAGTCAATTGCATACAGTGGATTTGTAAACAG
GATGGCTCCCCTTCTACTGAATTAGTTTCTGGAGGATCTGATAATCAAGTGATTCACTGGGAAATAGAGG
ATAATCAGCTTTTAAAAGCAGTGCATCTTCAAGGCCATGAAGGACCTGTTTATGCGGTGCATGCTGTTTA
CCAGAGGAGGACATCAGATCCTGCATTATGTACACTGATCGTTTCTGCAGCTGCAGATTCTGCTGTTCGA
CTCTGGTCTAAAAAGGGTCCAGAAGTAATGTGCCTTCAGACTTTAAACTTTGGAAATGGATTTGCTTTGG
CTCTCTGCTTATCTTTTTTGCCAAATACTGATGTTACCTGGAAGACTGGCCAGGTGGAACGAGGCAGGGC
CTGGAAGCCACCAGCCTCTCTCGCCCTCTGTAGCAGGAGCTGCGACTCTATGGTTTCATGTTACGCTTCC
ATTCTGTGCAAGGCTCTGTGGAAGGAGAAGCTGCACACATTCTGGCATCATAACAGAATTTCATTTCTTC
CATCTGCATTCAGGCCAATACCAATATTAGCATGTGGCAATGATGATTGCAGAATTCACATATTTGCTCA
ACAAAATGATCAGTTTCAGAAAGTGCTTTCTCTCTGTGGACATGAGGATTGGATTAGAGGAGTGGAATGG
GCAGCCTTTGGTAGAGATCTTTTCCTAGCAAGCTGTTCACAAGATTGCCTGATAAGAATATGGAAGCTGT
ATATAAAGTCAACATCTTTAGAAACTCAGGATGACGATAACATAAGACTGAAAGAAAATACTTTTACCAT
AGAAAATGAAAGTGTTAAAATAGCATTTGCTGTTACTCTGGAGACAGTGCTAGCCGGTCATGAAAACTGG
GTAAATGCAGTTCACTGGCAACCTGTGTTTTACAAAGATGGTGTCCTACAGCAGCCAGTGAGATTATTAT
CTGCTTCCATGGATAAAACCATGATTCTCTGGGCTCCAGATGAAGAGTCAGGAGTTTGGCTAGAACAGGT
TCGAGTAGGTGAAGTAGGTGGGAATACTTTGGGATTTTATGATTGCCAGTTCAATGAAGATGGCTCCATG
ATCATTGCTCATGCTTTCCACGGAGCGTTGCACCTTTGGAAACAGAATACAGTTAACCCAAGAGAGTGGA
CTCCAGAGATTGTCATTTCAGGACACTTTGATGGTGTCCAAGACCTAGTCTGGGATCCAGAAGGAGAATT
TATTATCACTGTTGGTACTGATCAGACAACTAGACTTTTTGCTCCATGGAAGAGAAAAGACCAATCACAG
GTGACTTGGCATGAAATTGCAAGGCCTCAGATACATGGGTATGACCTGAAATGTTTGGCAATGATTAATC
GGTTTCAGTTTGTATCTGGAGCAGATGAAAAAGTTCTTCGGGTTTTTTCTGCACCTCGGAATTTTGTGGA
AAATTTTTGTGCCATTACAGGACAATCACTGAATCATGTGCTCTGTAATCAAGATAGTGATCTTCCAGAA
GGAGCCACTGTCCCTGCATTGGGATTATCAAATAAAGCTGTCTTTCAGGGAGATATAGCTTCTCAGCCTT
CTGATGAAGAGGAGCTGTTAACTAGTACTGGTTTTGAGTATCAGCAGGTGGCCTTTCAGCCCTCCATACT
TACTGAGCCTCCCACTGAGGATCATCTTCTGCAGAATACTTTGTGGCCTGAAGTTCAAAAACTATATGGG
CACGGTTATGAAATATTTTGTGTTACTTGTAACAGTTCAAAGACTCTGCTTGCCTCAGCTTGTAAGGCAG
CTAAGAAAGAGCATGCAGCTATCATTCTTTGGAACACTACATCTTGGAAACAGGTGCAGAATTTAGTTTT
CCACAGTTTGACAGTCACGCAGATGGCCTTCTCACCTAATGAGAAGTTCTTACTAGCTGTTTCCAGAGAT
CGAACCTGGTCATTGTGGAAAAAGCAGGATACAATCTCACCTGAGTTCGAGCCAGTTTTTAGTCTTTTTG
CCTTCACCAACAAAATTACTTCTGTGCACAGTAGAATTATTTGGTCTTGTGATTGGAGTCCTGACAGCAA
GTATTTCTTCACTGGGAGTCGAGACAAAAAGGTGGTTGTCTGGGGTGAGTGCGACTCCACTGATGACTGT
ATTGAGCACAACATTGGCCCCTGCTCCTCAGTCCTGGACGTGGGTGGGGCTGTGACAGCTGTCAGCGTCT
GCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCAGTAGGATTGGAGTGTGGAAAGATTTGCTTATA
TACCTGGAAAAAGACTGATCAAGTTCCAGAAATAAATGACTGGACCCACTGTGTAGAAACAAGTCAAAGC
CAAAGTCATACACTGGCTATCAGAAAATTATGCTGGAAGAATTGCAGTGGAAAAACTGAACAGAAGGAAG
CAGAAGGTGCTGAGTGGTTACACTTTGCAAGCTGTGGTGAAGATCACACTGTGAAGATACACAGAGTCAA
TAAATGTGCACTGTAA

Translation (891 aa):
MVAPVLETSHVFCCPNRVRGVLNWSSGPRGLLAFGTSCSVVLYDPLKRVVVTNLNGHTARVNCIQWICKQ
DGSPSTELVSGGSDNQVIHWEIEDNQLLKAVHLQGHEGPVYAVHAVYQRRTSDPALCTLIVSAAADSAVR
LWSKKGPEVMCLQTLNFGNGFALALCLSFLPNTDVTWKTGQVERGRAWKPPASLALCSRSCDSMVSCYAS
ILCKALWKEKLHTFWHHNRISFLPSAFRPIPILACGNDDCRIHIFAQQNDQFQKVLSLCGHEDWIRGVEW
AAFGRDLFLASCSQDCLIRIWKLYIKSTSLETQDDDNIRLKENTFTIENESVKIAFAVTLETVLAGHENW
VNAVHWQPVFYKDGVLQQPVRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSM
IIAHAFHGALHLWKQNTVNPREWTPEIVISGHFDGVQDLVWDPEGEFIITVGTDQTTRLFAPWKRKDQSQ
VTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDSDLPE
GATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYQQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYG
HGYEIFCVTCNSSKTLLASACKAAKKEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNEKFLLAVSRD
RTWSLWKKQDTISPEFEPVFSLFAFTNKITSVHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGECDSTDDC
IEHNIGPCSSVLDVGGAVTAVSVCPVLHPSQRYVVAVGLECGKICLYTWKKTDQVPEINDWTHCVETSQS
QSHTLAIRKLCWKNCSGKTEQKEAEGAEWLHFASCGEDHTVKIHRVNKCAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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