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Report for CCDS5561.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5561.1 Public Homo sapiens 7 METTL27 24 110 108 CCDS HistoryNCBI Gene:155368Re-query CCDS DB by CCDS ID:5561.1Re-query CCDS DB by GeneID:155368See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5561.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297873.9 ENSP00000297873.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297873.9Link to Ensembl Protein Viewer:ENSP00000297873.4Re-query CCDS DB by Nucleotide ID:ENST00000297873Re-query CCDS DB by Protein ID:ENSP00000297873
Original member Current member NCBI NM_152559.3 NP_689772.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152559.3Link to Protein Sequence:NP_689772.2Re-query CCDS DB by Nucleotide ID:NM_152559Re-query CCDS DB by Protein ID:NP_689772Link to BLAST:NP_689772.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689772.2 245 Q8N6F8 245 100% 0 0

Chromosomal Locations for CCDS 5561.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73834743 73835002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73840031 73840120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73840414 73840549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73841070 73841198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73842018 73842140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGGCCCAGGAGGAGGGTGGGAGCCTGCCCGAGGTGCGGGCGCGGGTCAGGGCCGCGCATGGCATCCCCG
ACCTGGCCCAAAAGCTCCATTTCTATGACCGCTGGGCTCCGGACTACGACCAGGATGTGGCCACCCTGCT
GTACCGTGCGCCCCGCCTCGCAGTGGACTGCCTCACACAAGCCCTTCCAGGCCCGCCCCACAGTGCCCTG
ATCCTGGACGTGGCCTGTGGCACAGGCCTAGTGGCTGCCGAGCTGCGGGCTCCAGGCTTCCTCCAGCTGC
ATGGGGTGGATGGGAGCCCAGGGATGCTGGAACAGGCCCAGGCCCCCGGCCTCTATCAGCGCCTCAGCCT
CTGCACCCTGGGCCAGGAGCCTCTGCCCAGCCCGGAAGGGACCTTCGACGCGGTGCTGATAGTCGGTGCC
CTCAGTGACGGCCAGGTGCCCTGCAATGCGATACCTGAGCTACATGTCACCAAGCCAGGTGGGCTGGTGT
GTCTGACCACCAGGACCAACTCGTCCAACCTTCAATACAAGGAGGCTCTGGAGGCCACCCTGGACAGGCT
GGAGCAGGCTGGGATGTGGGAAGGCCTGGTGGCCTGGCCTGTGGACCGCCTGTGGACCGCTGGGAGCTGG
CTACCTCCGAGCTGGAGGTGGTATCCGGCATCTCTGCCAAGGATGGCTTCATCTCCGGCATTGTCTACCT
GTACCGAAAGTGGAAGGCGACCCAGGTTGAGGAAGTGA

Translation (245 aa):
MAQEEGGSLPEVRARVRAAHGIPDLAQKLHFYDRWAPDYDQDVATLLYRAPRLAVDCLTQALPGPPHSAL
ILDVACGTGLVAAELRAPGFLQLHGVDGSPGMLEQAQAPGLYQRLSLCTLGQEPLPSPEGTFDAVLIVGA
LSDGQVPCNAIPELHVTKPGGLVCLTTRTNSSNLQYKEALEATLDRLEQAGMWEGLVAWPVDRLWTAGSW
LPPSWRWYPASLPRMASSPALSTCTESGRRPRLRK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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