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Report for CCDS5550.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5550.1 Public Homo sapiens 7 BCL7B 24 110 108 CCDS HistoryNCBI Gene:9275Re-query CCDS DB by CCDS ID:5550.1Re-query CCDS DB by GeneID:9275See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5550.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223368.7 ENSP00000223368.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000223368.7Link to Ensembl Protein Viewer:ENSP00000223368.2Re-query CCDS DB by Nucleotide ID:ENST00000223368Re-query CCDS DB by Protein ID:ENSP00000223368
Original member Current member NCBI NM_001707.4 NP_001698.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001707.4Link to Protein Sequence:NP_001698.2Re-query CCDS DB by Nucleotide ID:NM_001707Re-query CCDS DB by Protein ID:NP_001698Link to BLAST:NP_001698.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001698.2 202 Q9BQE9-1 202 100% 0 0

Chromosomal Locations for CCDS 5550.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73537298 73537390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73537934 73538013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73539882 73540052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73543548 73543644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73552167 73552242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73557487 73557578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGTCGGGCCGGTCGGTCCGGGCGGAGACCCGCAGCCGGGCCAAGGACGACATCAAGAAGGTGATGGCGG
CCATCGAGAAAGTGCGGAAATGGGAGAAGAAGTGGGTGACTGTGGGTGACACGTCCCTGAGGATATTTAA
GTGGGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGTCAAAATCGAACAGTTCAGCAGCCCGAGAACCT
AATGGCTTTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTCTTGAATTCCAGGACGAAAACAGCAACC
AGAGTTCCGTGTCTGACGTCTATCAGCTTAAGGTGGACAGCAGCACCAACTCAAGCCCCAGCCCCCAGCA
GAGTGAGTCCCTGAGCCCAGCACACACCTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGGC
CAGGAGATCCTGGAGGAGCCCTCCCTGCCCTCCTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAGG
AAGAACCAGTTCCACTAGAGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCG
CTTCTGTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCTAG

Translation (202 aa):
MSGRSVRAETRSRAKDDIKKVMAAIEKVRKWEKKWVTVGDTSLRIFKWVPVTDSKEKEKSKSNSSAAREP
NGFPSDASANSSLLLEFQDENSNQSSVSDVYQLKVDSSTNSSPSPQQSESLSPAHTSDFRTDDSQPPTLG
QEILEEPSLPSSEVADEPPTLTKEEPVPLETQVVEEEEDSGAPPLKRFCVDQPTVPQTASES


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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