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Report for CCDS55469.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55469.1 Public Homo sapiens X PWWP3B 24 110 108 CCDS HistoryNCBI Gene:139221Re-query CCDS DB by CCDS ID:55469.1Re-query CCDS DB by GeneID:139221See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55469.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337685.6 ENSP00000338641.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337685.6Link to Ensembl Protein Viewer:ENSP00000338641.2Re-query CCDS DB by Nucleotide ID:ENST00000337685Re-query CCDS DB by Protein ID:ENSP00000338641
Original member Current member EBI ENST00000357175.6 ENSP00000349699.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357175.6Link to Ensembl Protein Viewer:ENSP00000349699.2Re-query CCDS DB by Nucleotide ID:ENST00000357175Re-query CCDS DB by Protein ID:ENSP00000349699
Original member Current member EBI ENST00000372552.1 ENSP00000361632.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372552.1Link to Ensembl Protein Viewer:ENSP00000361632.1Re-query CCDS DB by Nucleotide ID:ENST00000372552Re-query CCDS DB by Protein ID:ENSP00000361632
Original member Current member NCBI NM_001171020.2 NP_001164491.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001171020.2Link to Protein Sequence:NP_001164491.1Re-query CCDS DB by Nucleotide ID:NM_001171020Re-query CCDS DB by Protein ID:NP_001164491Link to BLAST:NP_001164491.1
Original member Current member NCBI NM_152423.5 NP_689636.3 Accepted alive Link to Nucleotide Sequence:NM_152423.5Link to Protein Sequence:NP_689636.3Re-query CCDS DB by Nucleotide ID:NM_152423Re-query CCDS DB by Protein ID:NP_689636Link to BLAST:NP_689636.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164491.1 696 Q5H9M0 696 100% 0 0
NP_689636.3 696 Q5H9M0 696 100% 0 0

Chromosomal Locations for CCDS 55469.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106205433 106207523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGGAGTCTGAGTATGTCCTATGCAACTGGAAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGATCTG
AAACTTCATCAAACAGTAAGAGGAAAAAGGCATTTTCTCTAGAAGTTCAAATACTCTCACTAGATGAAAA
AATTAAATTGGACAGCACAGAAACAAAGATCCTAAATAAATCTCAAATTGAAGCCATTGCTGCCTCATTA
GGACTACAGTCAGAGGACAGTGCTCCACCTACAGAGGAAACTGCCTATGGAAGATCACTAAAAGTGGCAC
TGGGTATTCTGAATGAGAGAACAAATTTGAGTCAAGCAAGCACTTCAGATGAAGAGGAGATCACTATGCT
GTCTCAAAATGTACCACAAAAACAGTCCGATTCACCCCCTCATAAAAAATACCGGAAGGATGAAGGTGAC
TTACCAGGGTGTCTTGAGGAAAGGGAAAACTCAGCATGCTTGTTAGCATCTTCAGAGAGTGATGATTCCC
TGTATGATGATAAATCACAAGCACCCACAATGGTCGATACTATTCCAAGTGAAGTGGAAACAAAGTCATT
ACAAAACTCTAGCTGGTGCGAGACTTTCCCTTCACTTTCGGAAGATAATGATGAAAAAGAGAACAAGAAT
AAGATTGATATCTCAGCAGTTATGTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATGTGTTAAAGATG
AAAAGTTTGCTCCACCTTTGTCACCTTTGTCATCAGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGA
GAGCGAGGATACCTGCCTAGAGACCCTGGCTGTTCCCTCTGAATGCTCTGCTTTCTCAGAGAATATTGAG
GATCCTGGAGAGGGTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCATGGAATCAGAGA
TGGGGGCTGCAGCATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTTTCATTTAGTGCCTCTAACCCTGT
CTGGGATTATTCACATCTTATGAGTAGTGAAAGAAATTTTCAGAGACTGGATTTTGAAGAACTTGAGGAA
GAAGGTCAAGCCTCTGACAAGTCATTGCTTCCAAGTCGCATTAATCTTTCTCTATTAGATGATGATGAGG
AAGACGAAGAACTTCCACGCTTCATTTTACATTATGAGACACATCCGTTTGAAACAGGAATGATAGTCTG
GTTTAAATATCAGAAATATCCATTTTGGCCAGCAGTGATAAAAAGTATCAGACGAAAAGAGAGGAAAGCA
AGTGTGCTTTTTGTTGAGGCAAACATGAATTCTGAAAAGAAGGGCATTAGAGTAAATTTTAGAAGATTAA
AGAAATTTGATTGTAAAGAGAAACAAATGCTAGTGGACAAAGCCAGGGAGGATTATAGTGAGAGTATTGA
CTGGTGCATCTCACTAATTTGTGACTACAGAGTTAGAATAGGTTGTGGTTCTTTCACGGGCTCTTTGCTT
GAGTATTATGCTGCTGATATTAGTTACCCAGTTAGGAAAGAAACAAAACAGGATACTTTCAGGAACAAAT
TTCCAAAGCTGCATAATGAAGATGCCAGGGAACCGATGGCTGTAACTTCCCAGACCAAGAAAATGTCCTT
CCAAAAAATTCTCCCTGACCGGATGAAGGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGGACTTCATT
GTGAATGCAAAGGGAACAGAGAACCATCTTCTGGCCATTGTAAATGGCACAAAAGGATCCAGATGGCTGA
AATCATTTTTGAATGCAAATAGGTTCACACCCTGTATTGAAACATACTTTGAGGATGAAGATCAGTTGGA
TGAAGTGGTGAAATATTTACAAGAAGTCTGCAATCAAATAGATCAAATAATGCCAACTTGGATAAAAGAT
GATAAAATTAAATTTATCCTAGAAGTTCTTCTGCCAGAAGCAATTATTTGTTCAATTTCTGCTGTTGATG
GGTTAGATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGACCATGTCTAGGCTACAGGGAAAGAGAATT
ATTTGATGCAAAAATAATATATGAAAAGAGACGAAAAGCACCAACAAATGAAGCTCACTAA

Translation (696 aa):
MESEYVLCNWKDQLWPAKVLSRSETSSNSKRKKAFSLEVQILSLDEKIKLDSTETKILNKSQIEAIAASL
GLQSEDSAPPTEETAYGRSLKVALGILNERTNLSQASTSDEEEITMLSQNVPQKQSDSPPHKKYRKDEGD
LPGCLEERENSACLLASSESDDSLYDDKSQAPTMVDTIPSEVETKSLQNSSWCETFPSLSEDNDEKENKN
KIDISAVMSVHSAVKEESACVKDEKFAPPLSPLSSDMLIMPKALKEESEDTCLETLAVPSECSAFSENIE
DPGEGPSNPCLDTSQNQPSMESEMGAAACPGSCSRECEVSFSASNPVWDYSHLMSSERNFQRLDFEELEE
EGQASDKSLLPSRINLSLLDDDEEDEELPRFILHYETHPFETGMIVWFKYQKYPFWPAVIKSIRRKERKA
SVLFVEANMNSEKKGIRVNFRRLKKFDCKEKQMLVDKAREDYSESIDWCISLICDYRVRIGCGSFTGSLL
EYYAADISYPVRKETKQDTFRNKFPKLHNEDAREPMAVTSQTKKMSFQKILPDRMKAARDRANKNLVDFI
VNAKGTENHLLAIVNGTKGSRWLKSFLNANRFTPCIETYFEDEDQLDEVVKYLQEVCNQIDQIMPTWIKD
DKIKFILEVLLPEAIICSISAVDGLDYEAAEAKYLKGPCLGYRERELFDAKIIYEKRRKAPTNEAH


Links Key
 Links to:   History report
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  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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