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Report for CCDS55137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55137.1 Public Homo sapiens 7 SAP25 24 110 108 CCDS HistoryNCBI Gene:100316904Re-query CCDS DB by CCDS ID:55137.1Re-query CCDS DB by GeneID:100316904See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55137.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538735.5 ENSP00000442339.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538735.5Link to Ensembl Protein Viewer:ENSP00000442339.1Re-query CCDS DB by Nucleotide ID:ENST00000538735Re-query CCDS DB by Protein ID:ENSP00000442339
Original member Current member EBI ENST00000614631.4 ENSP00000481351.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614631.4Link to Ensembl Protein Viewer:ENSP00000481351.1Re-query CCDS DB by Nucleotide ID:ENST00000614631Re-query CCDS DB by Protein ID:ENSP00000481351
Original member Current member NCBI NM_001348677.2 NP_001335606.1 Accepted alive Link to Nucleotide Sequence:NM_001348677.2Link to Protein Sequence:NP_001335606.1Re-query CCDS DB by Nucleotide ID:NM_001348677Re-query CCDS DB by Protein ID:NP_001335606Link to BLAST:NP_001335606.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335606.1 199 Q8TEE9 199 100% 0 0

Chromosomal Locations for CCDS 55137.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100572287 100572571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100572654 100572751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100572860 100573013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100573106 100573168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGACTCCACTAGCGCCCTGGGACCCCAAGTATGAAGCCAAAGCAGGACCTCGGCCGGTGTGGGGGGCCA
ACTGTAGCTCAGGAGCCTCGTTCTCAGGCCGGACGCTGTGTCACCCCTCATTCTGGCCGCTGTATGAAGC
AGCCTCGGGCAGGGGTCTCAGGCCCGTGGCCCCTGCCACAGGGCACTGGAATGGACAGCAGGCGCCCCCA
GATGCAGGGTTCCCGGTGGTGTGCTGTGAAGATGTCTTCCTCTCGGACCCTCTGCTGCCCCGGGGGCAGC
GTGTTCCCCTGTACCTGTCCAAGGCCCCCCAGCAGATGATGGGCTCCCTGAAACTGCTGCCGCCGCCCCC
CATCATGTCTGCCAGGGTGCTCCCCCGCCCATCACCCTCCCGGGGCCCCTCCACTGCCTGGCTCAGCGGG
CCGGAGCTGATCGCTCTCACTGGCCTGCTGCAGATGAGCCAGGGGGAGCCTAGGCCCAGCTCCTCCGCGG
TTGGCCCCCCAGACCATACCTCTGACCCACCCAGCCCCTGTGGTAGCCCCAGCAGTTCTCAGGGTGCTGA
CCTCTCTCTCCCACAGACCCCAGACACCCATTGTCCATAG

Translation (199 aa):
MTPLAPWDPKYEAKAGPRPVWGANCSSGASFSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPP
DAGFPVVCCEDVFLSDPLLPRGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSG
PELIALTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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