NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS55019.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55019.1 Public Homo sapiens 6 CRISP3 24 110 108 CCDS HistoryNCBI Gene:10321Re-query CCDS DB by CCDS ID:55019.1Re-query CCDS DB by GeneID:10321See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55019.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433368.6 ENSP00000389026.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433368.6Link to Ensembl Protein Viewer:ENSP00000389026.2Re-query CCDS DB by Nucleotide ID:ENST00000433368Re-query CCDS DB by Protein ID:ENSP00000389026
Original member Current member NCBI NM_001190986.3 NP_001177915.1 Accepted alive Link to Nucleotide Sequence:NM_001190986.3Link to Protein Sequence:NP_001177915.1Re-query CCDS DB by Nucleotide ID:NM_001190986Re-query CCDS DB by Protein ID:NP_001177915Link to BLAST:NP_001177915.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177915.1 268 P54108-3 268 100% 0 0

Chromosomal Locations for CCDS 55019.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 49728730 49728857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49731163 49731251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49733195 49733292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49733703 49733848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49735504 49735591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49736391 49736507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49737325 49737428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49744331 49744367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (807 nt):
ATGAAACAAATACTTCATCCTGCTCTGGAAACCACTGATCCCTGTTCCACCGGTTTTGTTTTCCCAGCAA
TGACATTATTCCCAGTGCTGTTGTTCCTGGTTGCTGGGCTGCTTCCATCTTTTCCAGCAAATGAAGATAA
GGATCCCGCTTTTACTGCTTTGTTAACCACCCAAACACAAGTGCAAAGGGAGATTGTGAATAAGCACAAT
GAACTGAGGAGAGCAGTATCTCCCCCTGCCAGAAACATGCTGAAGATGGAATGGAACAAAGAGGCTGCAG
CAAATGCCCAAAAGTGGGCAAACCAGTGCAATTACAGACACAGTAACCCAAAGGATCGAATGACAAGTCT
AAAATGTGGTGAGAATCTCTACATGTCAAGTGCCTCCAGCTCATGGTCACAAGCAATCCAAAGCTGGTTT
GATGAGTACAATGATTTTGACTTTGGTGTAGGGCCAAAGACTCCCAACGCAGTGGTTGGACATTATACAC
AGGTTGTTTGGTACTCTTCATACCTCGTTGGATGTGGAAATGCCTACTGTCCCAATCAAAAAGTTCTAAA
ATACTACTATGTTTGCCAATATTGTCCTGCTGGTAATTGGGCTAATAGACTATATGTCCCTTATGAACAA
GGAGCACCTTGTGCCAGTTGCCCAGATAACTGTGACGATGGACTATGCACCAATGGTTGCAAGTACGAAG
ATCTCTATAGTAACTGTAAAAGTTTGAAGCTCACATTAACCTGTAAACATCAGTTGGTCAGGGACAGTTG
CAAGGCCTCCTGCAATTGTTCAAACAGCATTTATTAA

Translation (268 aa):
MKQILHPALETTDPCSTGFVFPAMTLFPVLLFLVAGLLPSFPANEDKDPAFTALLTTQTQVQREIVNKHN
ELRRAVSPPARNMLKMEWNKEAAANAQKWANQCNYRHSNPKDRMTSLKCGENLYMSSASSSWSQAIQSWF
DEYNDFDFGVGPKTPNAVVGHYTQVVWYSSYLVGCGNAYCPNQKVLKYYYVCQYCPAGNWANRLYVPYEQ
GAPCASCPDNCDDGLCTNGCKYEDLYSNCKSLKLTLTCKHQLVRDSCKASCNCSNSIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH