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Report for CCDS54803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54803.1 Public Homo sapiens 4 PLK4 24 110 108 CCDS HistoryNCBI Gene:10733Re-query CCDS DB by CCDS ID:54803.1Re-query CCDS DB by GeneID:10733See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000513090.5 ENSP00000427554.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000513090.5Link to Ensembl Protein Viewer:ENSP00000427554.1Re-query CCDS DB by Nucleotide ID:ENST00000513090Re-query CCDS DB by Protein ID:ENSP00000427554
Original member Current member NCBI NM_001190799.2 NP_001177728.1 Accepted alive Link to Nucleotide Sequence:NM_001190799.2Link to Protein Sequence:NP_001177728.1Re-query CCDS DB by Nucleotide ID:NM_001190799Re-query CCDS DB by Protein ID:NP_001177728Link to BLAST:NP_001177728.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177728.1 938 O00444-2 938 100% 0 0

Chromosomal Locations for CCDS 54803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 127881135 127881164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127881831 127881926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127883439 127883553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127885708 127886728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127887396 127887496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127889866 127890236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127891092 127891196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127891579 127891681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127892365 127892514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127893285 127893418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127893513 127893604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127893734 127893881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127894953 127895093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127896801 127896907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 127898439 127898541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2817 nt):
ATGGCGACCTGCATCGGGGAGAAGATCGAGGATTTTAAAGTTGGAAATCTGCTTGGTAAAGGATCATTTG
CTGGTGTCTACAGAGCTGAGTCCATTCACACTGGTTTGGAAGTTGCAATCAAAATGCTTTATAACTATTT
TGAAGATAGCAATTATGTGTATCTGGTATTAGAAATGTGCCATAATGGAGAAATGAACAGGTATCTAAAG
AATAGAGTGAAACCCTTCTCAGAAAATGAAGCTCGACACTTCATGCACCAGATCATCACAGGGATGTTGT
ATCTTCATTCTCATGGTATACTACACCGGGACCTCACACTTTCTAACCTCCTACTGACTCGTAATATGAA
CATCAAGATTGCTGATTTTGGGCTGGCAACTCAACTGAAAATGCCACATGAAAAGCACTATACATTATGT
GGAACTCCTAACTACATTTCACCAGAAATTGCCACTCGAAGTGCACATGGCCTTGAATCTGATGTTTGGT
CCCTGGGCTGTATGTTTTATACATTACTTATCGGGAGACCACCCTTCGACACTGACACAGTCAAGAACAC
ATTAAATAAAGTAGTATTGGCAGATTATGAAATGCCATCTTTTTTGTCAATAGAGGCCAAGGACCTTATT
CACCAGTTACTTCGTAGAAATCCAGCAGATCGTTTAAGTCTGTCTTCAGTATTGGACCATCCTTTTATGT
CCCGAAATTCTTCAACAAAAAGTAAAGATTTAGGAACTGTGGAAGACTCAATTGATAGTGGGCATGCCAC
AATTTCTACTGCAATTACAGCTTCTTCCAGTACCAGTATAAGTGGTAGTTTATTTGACAAAAGAAGACTT
TTGATTGGTCAGCCACTCCCAAATAAAATGACTGTATTTCCAAAGAATAAAAGTTCAACTGATTTTTCTT
CTTCAGGAGATGGAAACAGTTTTTATACTCAGTGGGGAAATCAAGAAACCAGTAATAGTGGAAGGGGAAG
AGTAATTCAAGATGCAGAAGAAAGGCCACATTCTCGATACCTTCGTAGAGCTTATTCCTCTGATAGATCT
GGCACTTCTAATAGTCAGTCTCAAGCAAAAACATATACAATGGAACGATGTCACTCAGCAGAAATGCTTT
CAGTGTCCAAAAGATCAGGAGGAGGTGAAAATGAAGAGAGGTACTCACCCACAGACAACAATGCCAACAT
TTTTAACTTCTTTAAAGAAAAGACATCCAGTAGTTCTGGATCTTTTGAAAGACCTGATAACAATCAAGCA
CTCTCCAATCATCTTTGTCCAGGAAAAACTCCTTTTCCATTTGCAGACCCGACACCTCAGACTGAAACCG
TACAACAGTGGTTTGGGAATCTGCAAATAAATGCTCATTTAAGAAAAACTACTGAATATGACAGCATCAG
CCCAAACCGGGACTTCCAGGGCCATCCAGATTTGCAGAAGGACACATCAAAAAATGCCTGGACTGATACA
AAAGTCAAAAAGAACTCTGATGCTTCTGATAATGCACATTCTGTAAAACAGCAAAATACCATGAAATATA
TGACTGCACTTCACAGTAAACCTGAGATAATCCAACAAGAATGTGTTTTTGGCTCAGATCCTCTTTCTGA
ACAGAGCAAGACTAGGGGTATGGAGCCACCATGGGGTTATCAGAATCGTACATTAAGAAGCATTACATCT
CCGTTGGTTGCTCACAGGTTAAAACCAATCAGACAGAAAACCAAAAAGGCTGTGGTGAGCATACTTGATT
CAGAGGAGGTGTGTGTGGAGCTTGTAAAGGAGTATGCATCTCAAGAATATGTGAAAGAAGTTCTTCAGAT
ATCTAGTGATGGAAATACGATCACTATTTATTATCCAAATGGTGGTAGAGGTTTTCCTCTTGCTGATAGA
CCACCCTCACCTACTGACAACATCAGTAGGTACAGCTTTGACAATTTACCAGAAAAATACTGGCGAAAAT
ATCAATATGCTTCCAGGTTTGTACAGCTTGTAAGATCTAAATCTCCCAAAATCACTTATTTTACAAGATA
TGCTAAATGCATTTTGATGGAGAATTCTCCTGGTGCTGATTTTGAGGTTTGGTTTTATGATGGGGTAAAA
ATACACAAAACAGAAGATTTCATTCAGGTGATTGAAAAGACAGGGAAGTCTTACACTTTAAAAAGTGAAA
GTGAAGTTAATAGCTTGAAAGAGGAGATAAAAATGTATATGGACCATGCTAATGAGGGTCATCGTATTTG
TTTAGCACTGGAATCCATAATTTCAGAAGAGGAAAGGAAAACTAGGAGTGCTCCCTTTTTCCCAATAATC
ATAGGAAGAAAACCTGGTAGTACTAGTTCACCTAAGGCCTTATCACCTCCTCCTTCTGTGGATTCAAATT
ACCCAACGAGAGAGAGAGCATCTTTCAACAGAATGGTCATGCATAGTGCTGCTTCTCCAACACAGGCACC
AATCCTTAATCCCTCTATGGTTACAAATGAAGGACTTGGTCTTACAACTACAGCTTCTGGAACAGACATC
TCTTCTAATAGTCTAAAAGATTGTCTTCCTAAATCAGCACAACTTTTGAAATCTGTTTTTGTGAAAAATG
TTGGTTGGGCTACACAGTTAACTAGTGGAGCTGTGTGGGTTCAGTTTAATGATGGGTCCCAGTTGGTTGT
GCAGGCAGGAGTGTCTTCTATCAGTTATACCTCACCAAATGGTCAAACAACTAGGTATGGAGAAAATGAA
AAATTACCAGACTACATCAAACAGAAATTACAGTGTCTGTCTTCCATCCTTTTGATGTTTTCTAATCCGA
CTCCTAATTTTCATTGA

Translation (938 aa):
MATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMLYNYFEDSNYVYLVLEMCHNGEMNRYLK
NRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC
GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLI
HQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDLGTVEDSIDSGHATISTAITASSSTSISGSLFDKRRL
LIGQPLPNKMTVFPKNKSSTDFSSSGDGNSFYTQWGNQETSNSGRGRVIQDAEERPHSRYLRRAYSSDRS
GTSNSQSQAKTYTMERCHSAEMLSVSKRSGGGENEERYSPTDNNANIFNFFKEKTSSSSGSFERPDNNQA
LSNHLCPGKTPFPFADPTPQTETVQQWFGNLQINAHLRKTTEYDSISPNRDFQGHPDLQKDTSKNAWTDT
KVKKNSDASDNAHSVKQQNTMKYMTALHSKPEIIQQECVFGSDPLSEQSKTRGMEPPWGYQNRTLRSITS
PLVAHRLKPIRQKTKKAVVSILDSEEVCVELVKEYASQEYVKEVLQISSDGNTITIYYPNGGRGFPLADR
PPSPTDNISRYSFDNLPEKYWRKYQYASRFVQLVRSKSPKITYFTRYAKCILMENSPGADFEVWFYDGVK
IHKTEDFIQVIEKTGKSYTLKSESEVNSLKEEIKMYMDHANEGHRICLALESIISEEERKTRSAPFFPII
IGRKPGSTSSPKALSPPPSVDSNYPTRERASFNRMVMHSAASPTQAPILNPSMVTNEGLGLTTTASGTDI
SSNSLKDCLPKSAQLLKSVFVKNVGWATQLTSGAVWVQFNDGSQLVVQAGVSSISYTSPNGQTTRYGENE
KLPDYIKQKLQCLSSILLMFSNPTPNFH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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