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Report for CCDS54758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54758.1 Public Homo sapiens 4 UGDH 24 110 108 CCDS HistoryNCBI Gene:7358Re-query CCDS DB by CCDS ID:54758.1Re-query CCDS DB by GeneID:7358See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000501493.6 ENSP00000422909.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000501493.6Link to Ensembl Protein Viewer:ENSP00000422909.1Re-query CCDS DB by Nucleotide ID:ENST00000501493Re-query CCDS DB by Protein ID:ENSP00000422909
Original member Current member NCBI NM_001184700.2 NP_001171629.1 Accepted alive Link to Nucleotide Sequence:NM_001184700.2Link to Protein Sequence:NP_001171629.1Re-query CCDS DB by Nucleotide ID:NM_001184700Re-query CCDS DB by Protein ID:NP_001171629Link to BLAST:NP_001171629.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171629.1 427 O60701-2 427 100% 0 0

Chromosomal Locations for CCDS 54758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 39500143 39500253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39503875 39503985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39504417 39504508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39505237 39505370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39505618 39505748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39508566 39508660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39509760 39509907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39510353 39510550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39514083 39514184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 39521351 39521512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGTTTGAAATTAAGAAGATCTGTTGCATCGGTGCAGGCTATGTTGGAGGACCCACATGTAGTGTCATTG
CTCATATGTGTCCTGAAATCAGGGTAACGGTTGTTGATGTCAATGAATCAAGAATCAATGCGTGGAATTC
TCCTACACTTCCTATTTATGAGCCAGGACTAAAAGAAGTGGTAGAATCCTGTCGAGGAAAAAATCTTTTT
TTTTCTACCAATATTGATGATGCCATCAAAGAAGCTGATCTTGTATTTATTTCTGTGCTGTCCAACCCTG
AGTTTCTGGCAGAGGGAACAGCCATCAAGGACCTAAAGAACCCAGACAGAGTACTGATTGGAGGGGATGA
AACTCCAGAGGGCCAGAGAGCTGTGCAGGCCCTGTGTGCTGTATATGAGCACTGGGTTCCCAGAGAAAAG
ATCCTCACCACTAATACTTGGTCTTCAGAGCTTTCCAAACTGGCAGCAAATGCTTTTCTTGCCCAGAGAA
TAAGCAGCATTAACTCCATAAGTGCTCTGTGTGAAGCAACAGGAGCTGATGTAGAAGAGGTAGCAACAGC
GATTGGAATGGACCAGAGAATTGGAAACAAGTTTCTAAAAGCCAGTGTTGGGTTTGGTGGGAGCTGTTTC
CAAAAGGATGTTCTGAATTTGGTTTATCTCTGTGAGGCTCTGAATTTGCCAGAAGTAGCTCGTTATTGGC
AGCAGGTCATAGACATGAATGACTACCAGAGGAGGAGGTTTGCTTCCCGGATCATAGATAGTCTGTTTAA
TACAGTAACTGATAAGAAGATAGCTATTTTGGGATTTGCATTCAAAAAGGACACTGGTGATACAAGAGAA
TCTTCTAGTATATATATTAGCAAATATTTGATGGATGAAGGTGCACATCTACATATATATGATCCAAAAG
TACCTAGGGAACAAATAGTTGTGGATCTTTCTCATCCAGGTGTTTCAGAGGATGACCAAGTGTCCCGGCT
CGTGACCATTTCCAAGGATCCATATGAAGCATGTGATGGTGCCCATGCTGTTGTTATTTGCACTGAGTGG
GACATGTTTAAGGAATTGGATTATGAACGCATTCATAAAAAAATGCTAAAGCCAGCCTTTATCTTCGATG
GACGGCGTGTCCTGGATGGGCTCCACAATGAACTACAAACCATTGGCTTCCAGATTGAAACAATTGGCAA
AAAGGTGTCTTCAAAGAGAATTCCATATGCTCCTTCTGGTGAAATTCCGAAGTTTAGTCTTCAAGATCCA
CCTAACAAGAAACCTAAAGTGTAG

Translation (427 aa):
MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLF
FSTNIDDAIKEADLVFISVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREK
ILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCF
QKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRE
SSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEW
DMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKVSSKRIPYAPSGEIPKFSLQDP
PNKKPKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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