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Report for CCDS54642.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54642.1 Public Homo sapiens 3 PPP2R3A 24 110 108 CCDS HistoryNCBI Gene:5523Re-query CCDS DB by CCDS ID:54642.1Re-query CCDS DB by GeneID:5523See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54642.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000490467.5 ENSP00000419344.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000490467.5Link to Ensembl Protein Viewer:ENSP00000419344.1Re-query CCDS DB by Nucleotide ID:ENST00000490467Re-query CCDS DB by Protein ID:ENSP00000419344
Original member Current member NCBI NM_001190447.2 NP_001177376.1 Accepted alive Link to Nucleotide Sequence:NM_001190447.2Link to Protein Sequence:NP_001177376.1Re-query CCDS DB by Nucleotide ID:NM_001190447Re-query CCDS DB by Protein ID:NP_001177376Link to BLAST:NP_001177376.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177376.1 414 Q06190-3 414 100% 0 0

Chromosomal Locations for CCDS 54642.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 136027045 136027098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136040859 136040962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136049259 136049361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136070478 136070552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136078367 136078453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136082265 136082421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136087883 136087931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136090578 136090667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136102007 136102182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136103258 136103376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136106216 136106322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 136145043 136145166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1245 nt):
ATGGATATTGAAGAACAGAAAGCAGACATTTATGAAATGGGGAAAATTGCAAAGGTCTGTGGCTGTCCTC
TCTATTGGAAAGCCCCCATGTTCAGGGCTGCAGGGGGAGAGAAGACAGGATTTGTGACAGCACAGTCATT
CATTGCCATGTGGAGAAAGTTGCTGAATAACCATCATGATGATGCCTCTAAATTCATCTGTCTTCTAGCA
AAGCCCAACTGCAGCTCTCTAGAACAGGAGGATTTCATCCCTCTACTTCAGGATGTGGTGGATACCCACC
CTGGTCTCACGTTCCTGAAAGATGCTCCAGAATTCCACTCCCGCTACATCACCACGGTTATTCAGAGAAT
ATTCTACACAGTCAACAGATCTTGGAGTGGAAAAATTACTTCGACAGAGATAAGAAAAAGCAACTTTTTG
CAAACCCTAGCACTTTTGGAAGAAGAGGAAGATATAAACCAAATTACAGATTACTTCTCCTATGAACATT
TCTATGTTATTTATTGTAAATTCTGGGAACTAGATACTGATCACGACCTCTACATCAGCCAGGCCGATCT
GTCTCGATACAATGACCAGGCTTCATCAAGCAGGATTATTGAAAGGATATTCTCTGGTGCAGTAACAAGG
GGAAAAACAATACAGAAAGAGGGAAGAATGAGCTATGCAGATTTTGTTTGGTTTTTGATCTCTGAAGAAG
ACAAAAGGAATCCTACCAGCATTGAGTATTGGTTCCGCTGCATGGATGTGGATGGAGACGGTGTACTCTC
CATGTATGAGCTGGAGTACTTCTATGAGGAGCAGTGTGAACGGATGGAAGCCATGGGAATTGAGCCCTTG
CCATTCCATGATTTACTGTGCCAGATGCTTGACCTAGTGAAGCCAGCTGTTGATGGCAAAATAACTCTAA
GAGATCTGAAGAGGTGCAGAATGGCTCACATCTTCTATGACACTTTCTTTAATCTGGAGAAATACTTAGA
CCATGAACAGAGAGATCCCTTTGCGGTCCAGAAGGATGTTGAGAACGATGGGCCTGAGCCCTCAGACTGG
GACCGGTTTGCCGCTGAGGAGTATGAGACGCTTGTTGCAGAGGAATCTGCCCAAGCACAATTCCAGGAAG
GCTTTGAAGATTATGAAACAGATGAACCTGCCTCTCCCTCTGAATTTGGAAACAAAAGCAATAAAATATT
AAGTGCAAGCCTTCCAGAGAAATGTGGAAAGCTTCAATCAGTGGATGAAGAATAG

Translation (414 aa):
MDIEEQKADIYEMGKIAKVCGCPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLA
KPNCSSLEQEDFIPLLQDVVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKITSTEIRKSNFL
QTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYISQADLSRYNDQASSSRIIERIFSGAVTR
GKTIQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDVDGDGVLSMYELEYFYEEQCERMEAMGIEPL
PFHDLLCQMLDLVKPAVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDPFAVQKDVENDGPEPSDW
DRFAAEEYETLVAEESAQAQFQEGFEDYETDEPASPSEFGNKSNKILSASLPEKCGKLQSVDEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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