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Report for CCDS54437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54437.1 Public Homo sapiens 2 KCNJ13 24 110 108 CCDS HistoryNCBI Gene:3769Re-query CCDS DB by CCDS ID:54437.1Re-query CCDS DB by GeneID:3769See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54437.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409779.1 ENSP00000386408.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409779.1Link to Ensembl Protein Viewer:ENSP00000386408.1Re-query CCDS DB by Nucleotide ID:ENST00000409779Re-query CCDS DB by Protein ID:ENSP00000386408
Original member Current member NCBI NM_001172416.1 NP_001165887.1 Accepted alive Link to Nucleotide Sequence:NM_001172416.1Link to Protein Sequence:NP_001165887.1Re-query CCDS DB by Nucleotide ID:NM_001172416Re-query CCDS DB by Protein ID:NP_001165887Link to BLAST:NP_001165887.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165887.1 94 O60928-2 94 100% 0 0

Chromosomal Locations for CCDS 54437.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 232768753 232768813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 232771139 232771362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (285 nt):
ATGGACAGCAGTAATTGCAAAGTTATTGCTCCTCTCCTAAGTCAAAGATACCGGAGGATGGTCACCAAGG
ATGGCCACAGCACACTTCAAATGGATGGCGCTCAAAGAGGTCTTGCATATCTTCGAGATGCTTGGGGAAT
CCTAATGGACATGCGCTGGCGTTGGATGATGTTGGTCTTTTCTGCTTCTTTTGTTGTCCACTGGCTTGTC
TTTGCAGTGCTCTGGTGCTTTTGTGGCGAAGATTGCCCGGCCAAAAAATCGAGCTTTTTCAATTCGCTTT
ACTGA

Translation (94 aa):
MDSSNCKVIAPLLSQRYRRMVTKDGHSTLQMDGAQRGLAYLRDAWGILMDMRWRWMMLVFSASFVVHWLV
FAVLWCFCGEDCPAKKSSFFNSLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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