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Report for CCDS54024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54024.1 Public Homo sapiens 16 CES4A 24 110 108 CCDS HistoryNCBI Gene:283848Re-query CCDS DB by CCDS ID:54024.1Re-query CCDS DB by GeneID:283848See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54024.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540579.6 ENSP00000441907.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540579.6Link to Ensembl Protein Viewer:ENSP00000441907.1Re-query CCDS DB by Nucleotide ID:ENST00000540579Re-query CCDS DB by Protein ID:ENSP00000441907
Original member Current member NCBI NM_001190201.2 NP_001177130.1 Accepted alive Link to Nucleotide Sequence:NM_001190201.2Link to Protein Sequence:NP_001177130.1Re-query CCDS DB by Nucleotide ID:NM_001190201Re-query CCDS DB by Protein ID:NP_001177130Link to BLAST:NP_001177130.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177130.1 463 Q5XG92-6 463 100% 0 0

Chromosomal Locations for CCDS 54024.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67000672 67000779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67000857 67000990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67001308 67001461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67003070 67003174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67003256 67003360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67003515 67003553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67004084 67004224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67004793 67004873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67005240 67005393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67006391 67006519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67006745 67006817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67008974 67009142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGTACGTCAGCACGCGGGAACGGTACAAGTGGCTGCGCTTCAGCGAGGACTGTCTGTACCTGAACGTGT
ACGCGCCGGCGCGCGCGCCCGGGGATCCCCAGCTGCCAGTGATGGTCTGGTTCCCGGGAGGCGCCTTCAT
CGTGGGCGCTGCTTCTTCGTACGAGGGCTCTGACTTGGCCGCCCGCGAGAAAGTGGTGCTGGTGTTTCTG
CAGCACAGGCTCGGCATCTTCGGCTTCCTGAGCACGGACGACAGCCACGCGCGCGGGAACTGGGGGCTGC
TGGACCAGATGGCGGCTCTGCGCTGGGTGCAGGAGAACATCGCAGCCTTCGGGGGAGACCCAGGAAATGT
GACCCTGTTCGGCCAGTCGGCGGGGGCCATGAGCATCTCAGGACTGATGATGTCACCCCTAGCCTCGGGT
CTCTTCCATCGGGCCATTTCCCAGAGTGGCACCGCGTTATTCAGACTTTTCATCACTAGTAACCCACTGA
AAGTGGCCAAGAAGGTTGCCCACCTGGCTGGATGCAACCACAACAGCACACAGATCCTGGTAAACTGCCT
GAGGGCACTATCAGGGACCAAGGTGATGCGTGTGTCCAACAAGATGAGATTCCTCCAACTGAACTTCCAG
AGAGACCCGGAAGAGATTATCTGGTCCATGAGCCCTGTGGTGGATGGTGTGGTGATCCCAGATGACCCTT
TGGTGCTCCTGACCCAGGGGAAGGTTTCATCTGTGCCCTACCTTCTAGGTGTCAACAACCTGGAATTCAA
TTGGCTCTTGCCTTATATCATGAAGTTCCCGCTAAACCGGCAGGCGATGAGAAAGGAAACCATCACTAAG
ATGCTCTGGAGTACCCGCACCCTGTTGAATATCACCAAGGAGCAGGTACCACTTGTGGTGGAGGAGTACC
TGGACAATGTCAATGAGCATGACTGGAAGATGCTACGAAACCGTATGATGGACATAGTTCAAGATGCCAC
TTTCGTGTATGCCACACTGCAGACTGCTCACTACCACCGAGATGCCGGCCTCCCTGTCTACCTGTATGAA
TTTGAGCACCACGCTCGTGGAATAATCGTCAAACCCCGCACTGATGGGGCAGACCATGGGGATGAGATGT
ACTTCCTCTTTGGGGGCCCCTTCGCCACAGGCCTTTCCATGGGTAAGGAGAAGGCACTTAGCCTCCAGAT
GATGAAATACTGGGCCAACTTTGCCCGCACAGGAAACCCCAATGATGGGAATCTGCCCTGCTGGCCACGC
TACAACAAGGATGAAAAGTACCTGCAGCTGGATTTTACCACAAGAGTGGGCATGAAGCTCAAGGAGAAGA
AGATGGCTTTTTGGATGAGTCTGTACCAGTCTCAAAGACCTGAGAAGCAGAGGCAATTCTAA

Translation (463 aa):
MYVSTRERYKWLRFSEDCLYLNVYAPARAPGDPQLPVMVWFPGGAFIVGAASSYEGSDLAAREKVVLVFL
QHRLGIFGFLSTDDSHARGNWGLLDQMAALRWVQENIAAFGGDPGNVTLFGQSAGAMSISGLMMSPLASG
LFHRAISQSGTALFRLFITSNPLKVAKKVAHLAGCNHNSTQILVNCLRALSGTKVMRVSNKMRFLQLNFQ
RDPEEIIWSMSPVVDGVVIPDDPLVLLTQGKVSSVPYLLGVNNLEFNWLLPYIMKFPLNRQAMRKETITK
MLWSTRTLLNITKEQVPLVVEEYLDNVNEHDWKMLRNRMMDIVQDATFVYATLQTAHYHRDAGLPVYLYE
FEHHARGIIVKPRTDGADHGDEMYFLFGGPFATGLSMGKEKALSLQMMKYWANFARTGNPNDGNLPCWPR
YNKDEKYLQLDFTTRVGMKLKEKKMAFWMSLYQSQRPEKQRQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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