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Report for CCDS5396.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5396.1 Public Homo sapiens 7 NFE2L3 24 110 108 CCDS HistoryNCBI Gene:9603Re-query CCDS DB by CCDS ID:5396.1Re-query CCDS DB by GeneID:9603See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5396.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000056233.4 ENSP00000056233.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000056233.4Link to Ensembl Protein Viewer:ENSP00000056233.3Re-query CCDS DB by Nucleotide ID:ENST00000056233Re-query CCDS DB by Protein ID:ENSP00000056233
Original member Current member NCBI NM_004289.7 NP_004280.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004289.7Link to Protein Sequence:NP_004280.5Re-query CCDS DB by Nucleotide ID:NM_004289Re-query CCDS DB by Protein ID:NP_004280Link to BLAST:NP_004280.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004280.5 694 Q9Y4A8 694 100% 0 0

Chromosomal Locations for CCDS 5396.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26152499 26153068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26177943 26178122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26183701 26183784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26184533 26185783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2085 nt):
ATGAAGCACCTGAAGCGGTGGTGGTCGGCCGGCGGCGGCCTCCTGCACCTCACCCTCCTGCTGAGCTTGG
CGGGGCTCCGCGTAGACCTAGATCTTTACCTGCTGCTGCCGCCGCCCACCCTGCTGCAGGACGAGCTGCT
GTTCCTGGGCGGCCCGGCCAGCTCCGCCTACGCGCTCAGCCCCTTCTCGGCCTCGGGAGGGTGGGGGCGC
GCGGGCCACTTGCACCCCAAGGGCCGGGAGCTGGACCCTGCCGCGCCGCCCGAGGGCCAGCTGCTCCGGG
AGGTGCGCGCGCTCGGGGTCCCCTTCGTCCCTCGCACCAGCGTGGATGCATGGCTGGTGCACAGCGTGGC
TGCCGGGAGCGCGGACGAGGCCCACGGGCTGCTCGGCGCCGCCGCCGCCTCGTCCACCGGAGGAGCCGGC
GCCAGCGTGGACGGCGGCAGCCAGGCTGTGCAGGGGGGCGGCGGGGACCCCCGAGCGGCTCGGAGTGGCC
CCTTGGACGCCGGGGAAGAGGAGAAGGCACCCGCGGAACCGACGGCTCAGGTGCCGGACGCTGGCGGATG
TGCGAGCGAGGAGAATGGGGTACTAAGAGAAAAGCACGAAGCTGTGGATCATAGTTCCCAGCATGAGGAA
AATGAAGAAAGGGTGTCAGCCCAGAAGGAGAACTCACTTCAGCAGAATGATGATGATGAAAACAAAATAG
CAGAGAAACCTGACTGGGAGGCAGAAAAGACCACTGAATCTAGAAATGAGAGACATCTGAATGGGACAGA
TACTTCTTTCTCTCTGGAAGACTTATTCCAGTTGCTTTCATCACAGCCTGAAAATTCACTGGAGGGCATC
TCATTGGGAGATATTCCTCTTCCAGGCAGTATCAGTGATGGCATGAATTCTTCAGCACATTATCATGTAA
ACTTCAGCCAGGCTATAAGTCAGGATGTGAATCTTCATGAGGCCATCTTGCTTTGTCCCAACAATACATT
TAGAAGAGATCCAACAGCAAGGACTTCACAGTCACAAGAACCATTTCTGCAGTTAAATTCTCATACCACC
AATCCTGAGCAAACCCTTCCTGGAACTAATTTGACAGGATTTCTTTCACCGGTTGACAATCATATGAGGA
ATCTAACAAGCCAAGACCTACTGTATGACCTTGACATAAATATATTTGATGAGATAAACTTAATGTCATT
GGCCACAGAAGACAACTTTGATCCAATCGATGTTTCTCAGCTTTTTGATGAACCAGATTCTGATTCTGGC
CTTTCTTTAGATTCAAGTCACAATAATACCTCTGTCATCAAGTCTAATTCCTCTCACTCTGTGTGTGATG
AAGGTGCTATAGGTTATTGCACTGACCATGAATCTAGTTCCCATCATGACTTAGAAGGTGCTGTAGGTGG
CTACTACCCAGAACCCAGTAAGCTTTGTCACTTGGATCAAAGTGATTCTGATTTCCATGGAGATCTTACA
TTTCAACACGTATTTCATAACCACACTTACCACTTACAGCCAACTGCACCAGAATCTACTTCTGAACCTT
TTCCGTGGCCTGGGAAGTCACAGAAGATAAGGAGTAGATACCTTGAAGACACAGATAGAAACTTGAGCCG
TGATGAACAGCGTGCTAAAGCTTTGCATATCCCTTTTTCTGTAGATGAAATTGTCGGCATGCCTGTTGAT
TCTTTCAATAGCATGTTAAGTAGATATTATCTGACAGACCTACAAGTCTCACTTATCCGTGACATCAGAC
GAAGAGGGAAAAATAAAGTTGCTGCGCAGAACTGTCGTAAACGCAAATTGGACATAATTTTGAATTTAGA
AGATGATGTATGTAACTTGCAAGCAAAGAAGGAAACTCTTAAGAGAGAGCAAGCACAATGTAACAAAGCT
ATTAACATAATGAAACAGAAACTGCATGACCTTTATCATGATATTTTTAGTAGATTAAGAGATGACCAAG
GTAGGCCAGTCAATCCCAACCACTATGCTCTCCAGTGTACCCATGATGGAAGTATCTTGATAGTACCCAA
AGAACTGGTGGCCTCAGGCCACAAAAAGGAAACCCAAAAGGGAAAGAGAAAGTGA

Translation (694 aa):
MKHLKRWWSAGGGLLHLTLLLSLAGLRVDLDLYLLLPPPTLLQDELLFLGGPASSAYALSPFSASGGWGR
AGHLHPKGRELDPAAPPEGQLLREVRALGVPFVPRTSVDAWLVHSVAAGSADEAHGLLGAAAASSTGGAG
ASVDGGSQAVQGGGGDPRAARSGPLDAGEEEKAPAEPTAQVPDAGGCASEENGVLREKHEAVDHSSQHEE
NEERVSAQKENSLQQNDDDENKIAEKPDWEAEKTTESRNERHLNGTDTSFSLEDLFQLLSSQPENSLEGI
SLGDIPLPGSISDGMNSSAHYHVNFSQAISQDVNLHEAILLCPNNTFRRDPTARTSQSQEPFLQLNSHTT
NPEQTLPGTNLTGFLSPVDNHMRNLTSQDLLYDLDINIFDEINLMSLATEDNFDPIDVSQLFDEPDSDSG
LSLDSSHNNTSVIKSNSSHSVCDEGAIGYCTDHESSSHHDLEGAVGGYYPEPSKLCHLDQSDSDFHGDLT
FQHVFHNHTYHLQPTAPESTSEPFPWPGKSQKIRSRYLEDTDRNLSRDEQRAKALHIPFSVDEIVGMPVD
SFNSMLSRYYLTDLQVSLIRDIRRRGKNKVAAQNCRKRKLDIILNLEDDVCNLQAKKETLKREQAQCNKA
INIMKQKLHDLYHDIFSRLRDDQGRPVNPNHYALQCTHDGSILIVPKELVASGHKKETQKGKRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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