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Report for CCDS53749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53749.1 Public Homo sapiens 12 TAS2R43 24 110 108 CCDS HistoryNCBI Gene:259289Re-query CCDS DB by CCDS ID:53749.1Re-query CCDS DB by GeneID:259289See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53749.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531678.1 ENSP00000431719.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000531678.1Link to Ensembl Protein Viewer:ENSP00000431719.1Re-query CCDS DB by Nucleotide ID:ENST00000531678Re-query CCDS DB by Protein ID:ENSP00000431719
Original member Current member NCBI NM_176884.2 NP_795365.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176884.2Link to Protein Sequence:NP_795365.2Re-query CCDS DB by Nucleotide ID:NM_176884Re-query CCDS DB by Protein ID:NP_795365Link to BLAST:NP_795365.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795365.2 309 P59537 309 100% 0 0

Chromosomal Locations for CCDS 53749.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 11091300 11092229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGATAACTTTTCTACCCATCATTTTTTCCAGTCTGGTAGTGGTTACATTTGTTATTGGAAATTTTGCTA
ATGGCTTCATAGCACTGGTAAATTCCATTGAGTGGTTCAAGAGACAAAAGATCTCCTTTGCTGACCAAAT
TCTCACTGCTCTGGCGGTCTCCAGAGTTGGTTTGCTCTGGGTATTATTATTAAACTGGTATTCAACTGTG
TTGAATCCAGCTTTTAATAGTGTAGAAGTAAGAACTACTGCTTATAATATCTGGGCAGTGATCAACCATT
TCAGCAACTGGCTTGCTACTACCCTCAGCATATTTTATTTGCTCAAGATTGCCAATTTCTCCAACTTTAT
TTTTCTTCACTTAAAGAGGAGAGTTAAGAGTGTCATTCTGGTGATGTTGTTGGGGCCTTTGCTATTTTTG
GCTTGTCATCTTTTTGTGATAAACATGAATGAGATTGTGCGGACAAAAGAATTTGAAGGAAACATGACTT
GGAAGATCAAATTGAAGAGTGCAATGTACTTTTCAAATATGACTGTAACCATGGTAGCAAACTTAGTACC
CTTCACTCTGACCCTACTATCTTTTATGCTGTTAATCTGTTCTTTGTGTAAACATCTCAAGAAGATGCAG
CTCCATGGTAAAGGATCTCAAGATCCCAGCACCAAGGTCCACATAAAAGCTTTGCAAACTGTGATCTCCT
TCCTCTTGTTATGTGCCATTTACTTTCTGTCCATAATGATATCAGTTTGGAGTTTTGGAAGTCTGGAAAA
CAAACCTGTCTTCATGTTCTGCAAAGCTATTAGATTCAGCTATCCTTCAATCCACCCATTCATCCTGATT
TGGGGAAACAAGAAGCTAAAGCAGACTTTTCTTTCAGTTTTTTGGCAAATGAGGTACTGGGTGAAAGGAG
AGAAGACTTCATCTCCATAG

Translation (309 aa):
MITFLPIIFSSLVVVTFVIGNFANGFIALVNSIEWFKRQKISFADQILTALAVSRVGLLWVLLLNWYSTV
LNPAFNSVEVRTTAYNIWAVINHFSNWLATTLSIFYLLKIANFSNFIFLHLKRRVKSVILVMLLGPLLFL
ACHLFVINMNEIVRTKEFEGNMTWKIKLKSAMYFSNMTVTMVANLVPFTLTLLSFMLLICSLCKHLKKMQ
LHGKGSQDPSTKVHIKALQTVISFLLLCAIYFLSIMISVWSFGSLENKPVFMFCKAIRFSYPSIHPFILI
WGNKKLKQTFLSVFWQMRYWVKGEKTSSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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