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Report for CCDS5368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5368.1 Public Homo sapiens 7 FERD3L 24 110 108 CCDS HistoryNCBI Gene:222894Re-query CCDS DB by CCDS ID:5368.1Re-query CCDS DB by GeneID:222894See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5368.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275461.3 ENSP00000275461.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000275461.3Link to Ensembl Protein Viewer:ENSP00000275461.3Re-query CCDS DB by Nucleotide ID:ENST00000275461Re-query CCDS DB by Protein ID:ENSP00000275461
Original member Current member NCBI NM_152898.2 NP_690862.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152898.2Link to Protein Sequence:NP_690862.1Re-query CCDS DB by Nucleotide ID:NM_152898Re-query CCDS DB by Protein ID:NP_690862Link to BLAST:NP_690862.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690862.1 166 Q96RJ6 166 100% 0 0

Chromosomal Locations for CCDS 5368.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19144862 19145362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGGCGGCCTATCCGGAGAGCTGCGTGGACACTACGGTGCTGGACTTCGTCGCAGACCTGTCCCTGGCCT
CCCCGAGACGCCCTCTCCTCTGCGACTTCGCACCCGGGGTCTCCTTGGGGGACCCAGCCCTTGCGCTCCG
AGAGGGAAGACCCAGGAGGATGGCGCGGTTTGAAGAGGGGGACCCAGAAGAAGAGGAGTGCGAAGTGGAC
CAGGGGGACGGAGAAGAGGAGGAGGAAGAGGAGCGCGGAAGAGGTGTCTCCCTATTAGGCCGCCCCAAGA
GGAAAAGGGTGATCACCTACGCCCAGCGCCAGGCCGCCAACATCCGCGAAAGGAAGCGGATGTTCAACCT
CAACGAGGCCTTTGACCAGCTGCGGAGGAAGGTGCCCACGTTTGCTTACGAGAAAAGGCTGTCCCGGATC
GAGACCCTCCGCCTGGCCATCGTCTATATCTCCTTCATGACCGAGCTCTTGGAGAGCTGTGAGAAGAAGG
AAAGCGGCTGA

Translation (166 aa):
MAAYPESCVDTTVLDFVADLSLASPRRPLLCDFAPGVSLGDPALALREGRPRRMARFEEGDPEEEECEVD
QGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRI
ETLRLAIVYISFMTELLESCEKKESG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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