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Report for CCDS5362.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5362.1 Public Homo sapiens 7 BZW2 24 110 108 CCDS HistoryNCBI Gene:28969Re-query CCDS DB by CCDS ID:5362.1Re-query CCDS DB by GeneID:28969See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5362.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258761.8 ENSP00000258761.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258761.8Link to Ensembl Protein Viewer:ENSP00000258761.3Re-query CCDS DB by Nucleotide ID:ENST00000258761Re-query CCDS DB by Protein ID:ENSP00000258761
Original member Current member EBI ENST00000433922.6 ENSP00000397249.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433922.6Link to Ensembl Protein Viewer:ENSP00000397249.2Re-query CCDS DB by Nucleotide ID:ENST00000433922Re-query CCDS DB by Protein ID:ENSP00000397249
Original member Current member NCBI NM_001159767.2 NP_001153239.1 Accepted alive Link to Nucleotide Sequence:NM_001159767.2Link to Protein Sequence:NP_001153239.1Re-query CCDS DB by Nucleotide ID:NM_001159767Re-query CCDS DB by Protein ID:NP_001153239Link to BLAST:NP_001153239.1
Original member Current member NCBI NM_001362717.2 NP_001349646.1 Accepted alive Link to Nucleotide Sequence:NM_001362717.2Link to Protein Sequence:NP_001349646.1Re-query CCDS DB by Nucleotide ID:NM_001362717Re-query CCDS DB by Protein ID:NP_001349646Link to BLAST:NP_001349646.1
Original member Current member NCBI NM_014038.3 NP_054757.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014038.3Link to Protein Sequence:NP_054757.1Re-query CCDS DB by Nucleotide ID:NM_014038Re-query CCDS DB by Protein ID:NP_054757Link to BLAST:NP_054757.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153239.1 419 Q9Y6E2-1 419 100% 0 0
NP_001349646.1 419 Q9Y6E2-1 419 100% 0 0
NP_054757.1 419 Q9Y6E2-1 419 100% 0 0

Chromosomal Locations for CCDS 5362.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 16665444 16665501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16674412 16674588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16681301 16681404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16682780 16682845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16685905 16686040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16689797 16689906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16694834 16695004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16696915 16697061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16698048 16698186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16704547 16704669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 16706060 16706088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGAATAAGCATCAGAAGCCAGTGCTAACAGGCCAGCGGTTCAAAACTCGGAAAAGGGATGAAAAAGAGA
AATTCGAACCCACAGTCTTCAGGGATACACTTGTCCAGGGGCTTAATGAGGCTGGTGATGACCTTGAAGC
TGTAGCCAAATTTCTGGACTCTACAGGCTCAAGATTAGATTATCGTCGCTATGCAGACACACTCTTCGAT
ATCCTGGTGGCTGGCAGTATGCTTGCCCCTGGAGGAACGCGCATAGATGATGGTGACAAGACCAAGATGA
CCAACCACTGTGTGTTTTCAGCAAATGAAGATCATGAAACCATCCGAAACTATGCTCAGGTCTTCAATAA
ACTCATCAGGAGATATAAGTATTTGGAGAAGGCATTTGAAGATGAAATGAAAAAGCTTCTCCTCTTCCTT
AAAGCCTTTTCCGAAACAGAGCAGACAAAGTTGGCGATGCTGTCGGGGATTCTGCTGGGCAATGGCACCC
TGCCCGCCACCATCCTCACCAGTCTCTTCACCGACAGCTTAGTCAAAGAAGGCATTGCGGCCTCATTTGC
TGTCAAGCTTTTCAAAGCATGGATGGCAGAAAAAGATGCCAACTCTGTTACCTCGTCTTTGAGAAAAGCC
AACTTAGACAAGAGGCTGCTTGAACTCTTTCCAGTTAACAGACAGAGTGTGGATCATTTTGCTAAATACT
TCACTGACGCAGGTCTTAAGGAGCTTTCCGACTTCCTCCGAGTCCAGCAGTCCCTGGGCACCAGGAAGGA
ACTGCAGAAGGAGCTCCAGGAGCGTCTTTCTCAGGAATGCCCGATCAAGGAGGTGGTGCTTTATGTCAAA
GAAGAAATGAAGAGGAATGATCTTCCAGAAACAGCAGTGATTGGTCTTCTGTGGACATGTATAATGAACG
CTGTTGAGTGGAACAAGAAGGAAGAACTTGTTGCAGAGCAGGCTCTGAAGCACCTGAAGCAATATGCTCC
CCTGCTGGCCGTGTTCAGCTCCCAAGGCCAGTCAGAGCTGATCCTCCTCCAGAAGGTTCAGGAATACTGC
TACGACAACATCCATTTCATGAAAGCCTTTCAGAAGATTGTGGTTCTCTTTTATAAAGCTGATGTTCTGA
GCGAAGAAGCAATACTGAAATGGTATAAGGAAGCACATGTTGCTAAAGGCAAAAGTGTTTTTCTTGACCA
GATGAAGAAATTTGTTGAGTGGTTACAAAATGCAGAAGAAGAATCCGAATCGGAAGGTGAGGAAAATTAA

Translation (419 aa):
MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFD
ILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFL
KAFSETEQTKLAMLSGILLGNGTLPATILTSLFTDSLVKEGIAASFAVKLFKAWMAEKDANSVTSSLRKA
NLDKRLLELFPVNRQSVDHFAKYFTDAGLKELSDFLRVQQSLGTRKELQKELQERLSQECPIKEVVLYVK
EEMKRNDLPETAVIGLLWTCIMNAVEWNKKEELVAEQALKHLKQYAPLLAVFSSQGQSELILLQKVQEYC
YDNIHFMKAFQKIVVLFYKADVLSEEAILKWYKEAHVAKGKSVFLDQMKKFVEWLQNAEEESESEGEEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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