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Report for CCDS53528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53528.1 Public Homo sapiens 10 WASHC2C 24 110 108 CCDS HistoryNCBI Gene:253725Re-query CCDS DB by CCDS ID:53528.1Re-query CCDS DB by GeneID:253725See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540872.6 ENSP00000439811.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540872.6Link to Ensembl Protein Viewer:ENSP00000439811.1Re-query CCDS DB by Nucleotide ID:ENST00000540872Re-query CCDS DB by Protein ID:ENSP00000439811
Original member Current member NCBI NM_001169106.2 NP_001162577.1 Accepted alive Link to Nucleotide Sequence:NM_001169106.2Link to Protein Sequence:NP_001162577.1Re-query CCDS DB by Nucleotide ID:NM_001169106Re-query CCDS DB by Protein ID:NP_001162577Link to BLAST:NP_001162577.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001162577.1 1279 Q9Y4E1-6 1279 100% 0 0

Chromosomal Locations for CCDS 53528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 45727318 45727320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45727417 45727539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45728862 45729026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45737983 45738045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45740073 45740246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45743390 45743483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45744821 45744882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45746600 45746647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45750096 45750206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45750751 45750838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45751482 45751553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45752588 45752706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45753180 45753237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45754486 45754545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45754936 45755115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45757012 45757139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45759315 45759401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45763388 45763489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45765679 45765810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45769449 45769618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45773256 45773358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45777273 45777425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45778953 45779135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45784565 45784693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45784821 45784901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45787035 45787247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45788871 45789491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45790356 45790533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45792261 45792400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3840 nt):
ATGATGAACCGGACGACCCCCGACCAGGAGCTGGTGCCGGCGTCGGAGCCCGTGTGGGAGCGGCCGTGGT
CGGTGGAGGAGATCCGCAGGAGCAGCCAGAGCTGGTCGCTGGCGGCCGACGCGGGCCTACTACAGTTTCT
ACAGGAATTCTCACAGCAAACTATCTCTAGGACCCATGAAATCAAGAAACAAGTGGACGGACTAATCCGG
GAAACCAAAGCCACAGATTGTCGCCTGCATAATGTCTTCAATGACTTCCTTATGCTCTCTAATACCCAGT
TCATAGAGAATCGTGTATATGATGAAGAAGTGGAGGAGCCAGTACTCAAGGCTGAGGCAGAAAAAACAGA
GCAGGAGAAGACACGAGAGCAGAAAGAAGTAGATCTCATTCCTAAAGTCCAGGAGGCTGTGAACTATGGC
TTACAAGTATTGGACAGTGCCTTTGAGCAACTTGATATCAAAGCAGGAAACTCAGACTCCGAGGAAGATG
ATGCTAATGGGCGGGTGGAACTGATCCTTGAACCAAAGGATCTATACATTGATCGTCCTTTACCATATCT
CATTGGGTCAAAGCTGTTCATGGAACAAGAAGATGTAGGTCTTGGAGAGCTGTCCAGTGAAGAAGGCTCT
GTAGGCAGTGATCGTGGCAGTATTGTGGACACTGAGGAAGAGAAAGAAGAGGAGGAGTCAGATGAAGATT
TTGCCCATCACAGTGACAATGAACAAAACCAGCACACCACACAAATGAGTGATGAGGAAGAGGATGATGA
TGGCTGTGACCTTTTTGCTGACTCTGAGAAGGAGGAGGAAGATATTGAGGACATTGAAGAAAATACTAGA
CCTAAAAGAAGCAGACCTACATCGTTTGCAGATGAGCTGGCTGCCCGCATCAAGGGGGATGCCATGGGTC
GAGTGGACGAGGAGCCGACAACCTTACCCTCAGGAGAAGCAAAACCTCGGAAGACACTCAAAGAGAAGAA
GGAAAGGAGAACTCCTTCAGACGATGAAGAGGATAACTTATTCGCACCCCCCAAGCTGACCGACGAGGAC
TTCTCGCCATTTGGCTCTGGAGGTGGCCTGTTCAGTGGCGGCAAGGGGCTATTTGATGATGAGGACGAGG
AGAGTGACCTCTTCACGGAAGCCTCCCAGGATCGGCAAGCTGGAGCCTCTGTTAAGGAGGAGTCTTCATC
ATCCAAACCTGGAAAGAAAATCCCAGCAGGAGCTGTTTCTGTATTTTTAGGAGACACGGATGTGTTTGGT
GCTGCCTCCGTTCCATCACTGAAGGAGCCACAGAAGCCTGAGCAGCCCACTCCAAGGAAAAGCCCCTATG
GTCCCCCTCCCACTGGCCTCTTTGATGATGATGATGGTGATGATGATGACGACTTTTTCTCGGCACCCCA
CAGCAAACCTTCTAAAACACGCAAAGTCCAATCCACTGCCGATATCTTTGGTGACGAAGAAGGAGATCTG
TTCAAAGAAAAAGCCGTAGCATCGCCAGAAGCCACTGTGAGTCAGACAGATGAAAATAAAGCAAGAGCAG
AAAAAAAGGTTACCTTATCTTACAGCAAAAATCTCAAGCCCTCATCAGAAACAAAGACTCAAAAAGGCTT
ATTTTCAGATGAGGAGGACTCTGAGGATTTGTTTTCTTCTCAAAGTGCGAGTAACTTAAAAGGTGCATCT
CTGCTGCCTGGCAAGCTCCCCACGTCGGTTTCCCTGTTTGATGATGAAGATGAAGAGGATAATCTTTTTG
GGGGTACAGCTGCTAAGAAGCAGACATTGTCTCTACAAGCTCAGAGAGAAGAGAAAGCAAAAGCCTCCGA
GCTCTCCAAAAAGAAAGCATCTGCCCTGTTGTTCAGCAGTGATGAGGAGGACCAGTGGAATATTCCTGCT
TCACAGACCCACTTAGCATCTGACAGCAGGTCTAAAGGAGAACCCAGGGATTCTGGGACCCTCCAGAGCC
AGGAGGCCAAGGCTGTGAAAAAGACCAGTCTCTTTGAGGAAGACAAAGAAGATGATCTTTTTGCCATTGC
CAAGGACAGCCAAAAGAAGACCCAGAGAGTGTCACTCCTCTTTGAAGACGATGTTGATAGCGGAGGCTCT
CTGTTTGGCTCTCCTCCCACATCTGTTCCTCCTGCAACAAAGAAAAAAGAGACTGTCTCTGAGGCACCAC
CTTTGCTGTTCAGCGATGAAGAAGAGAAGGAGGCACAACTTGGAGTGAAGTCTGTGGATAAGAAGGTTGA
GAGTGCCAAGGAGTCATTAAAATTTGGGAGAACTGATGTGGCTGAGTCAGAAAAGGAAGGACTTTTGACT
AGATCTGCTCAGGAAACAGTCAAGCATTCTGATTTATTTTCTTCATCATCCCCATGGGACAAAGGAACCA
AGCCTAGAACCAAAACTGTTCTTAGCTTGTTTGATGAGGAAGAGGATAAAATGGAAGATCAAAACATTAT
CCAGGCTCCACAGAAAGAAGTAGGAAAGGGCTGCGATCCTGATGCCCACCCCAAGAGCACAGGTGTCTTC
CAGGATGAAGAGCTGCTTTTCAGCCACAAGCTCCAAAAGGACAATGACCCAGATGTTGACCTTTTTGCTG
GCACCAAAAAAACCAAGCTGTTAGAGCCAAGTGTTGGGAGCCTGTTTGGGGATGATGAAGATGATGATCT
TTTCAGCTCTGCCAAGTCCCAGCCTTTGGCAAATTTAGCGATCAACCCAGCGGCCTTGCTGCCCACAGCG
GCTTCCCAGATCTCTGAAGTAAAGCCTGTTTTGCCAGAATTGGCTTTTCCTTCATCTGAACACAGAAGGA
GCCACGGTCTGGAAAGTGTGCCTGTCCTTCCCGGGAGTGGGGAGGCCGGTGTGAGTTTTGATCTTCCAGC
TCAGGCAGACACCTTACACAGTGCAAACAAGAGCCGTGTCAAGATGAGAGGGAAGCGTAGACCGCAGACC
CGTGCAGCTAGGCGGCTGGCTGCTCAGGAGTCCAGCGAGGCTGAGGACATGAGCGTCCCCAGAGGACCCA
TTGCACAGTGGGCTGATGGCGCCATTTCCCCAAATGGCCATCGGCCACAGCTCAGAGCAGCCAGTGGAGA
AGACAGCACTGAGGAGGCCCTGGCAGCTGCCGCTGCACCTTGGGAAGGTGGTCCTGTGCCTGGAGTGGAC
ACAAGCCCCTTTGCAAAGTCTCTGGGTCATTCCAGAGGGGAGGCTGACCTTTTTGATTCTGGGGACATTT
TTTCCACGGGCACTGGATCTCAGTCCGTGGAGAGAACAAAACCCAAGGCAAAGATAGCAGAGAATCCTGC
CAACCCACCAGTGGGTGGTAAAGCAAAGAGCCCCATGTTTCCTGCTCTAGGCGAGGCCAGCAGTGATGAT
GATCTCTTTCAGTCTGCTAAACCAAAACCAGCAAAGAAAACAAATCCCTTTCCTCTCCTGGAAGATGAGG
ATGACCTCTTTACAGATCAGAAAGTCAAGAAGAATGAGACAAAATCCAGTAGTCAGCAGGATGTCATATT
AACAACACAAGATATTTTTGAGGATGATATATTTGCTACGGAAGCAATTAAACCCTCTCAGAAAACCAGA
GAGAAGGAGAAAACATTGGAATCTAATTTATTTGATGATAACATTGATATCTTTGCTGACTTAACTGTAA
AACCAAAAGAAAAGTCCAAAAAGAAAGTGGAAGCCAAGTCTATATTTGATGATGATATGGATGACATCTT
CTCCACTGGTATCCAGGCTAAGACAACCAAACCAAAAAGCCGATCTGCACAGGCCGCACCTGAACCAAGA
TTTGAACACAAGGTGTCCAACATCTTTGATGATCCCCTGAATGCCTTTGGAGGCCAGTAG

Translation (1279 aa):
MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGLLQFLQEFSQQTISRTHEIKKQVDGLIR
ETKATDCRLHNVFNDFLMLSNTQFIENRVYDEEVEEPVLKAEAEKTEQEKTREQKEVDLIPKVQEAVNYG
LQVLDSAFEQLDIKAGNSDSEEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGS
VGSDRGSIVDTEEEKEEEESDEDFAHHSDNEQNQHTTQMSDEEEDDDGCDLFADSEKEEEDIEDIEENTR
PKRSRPTSFADELAARIKGDAMGRVDEEPTTLPSGEAKPRKTLKEKKERRTPSDDEEDNLFAPPKLTDED
FSPFGSGGGLFSGGKGLFDDEDEESDLFTEASQDRQAGASVKEESSSSKPGKKIPAGAVSVFLGDTDVFG
AASVPSLKEPQKPEQPTPRKSPYGPPPTGLFDDDDGDDDDDFFSAPHSKPSKTRKVQSTADIFGDEEGDL
FKEKAVASPEATVSQTDENKARAEKKVTLSYSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASNLKGAS
LLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQREEKAKASELSKKKASALLFSSDEEDQWNIPA
SQTHLASDSRSKGEPRDSGTLQSQEAKAVKKTSLFEEDKEDDLFAIAKDSQKKTQRVSLLFEDDVDSGGS
LFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLT
RSAQETVKHSDLFSSSSPWDKGTKPRTKTVLSLFDEEEDKMEDQNIIQAPQKEVGKGCDPDAHPKSTGVF
QDEELLFSHKLQKDNDPDVDLFAGTKKTKLLEPSVGSLFGDDEDDDLFSSAKSQPLANLAINPAALLPTA
ASQISEVKPVLPELAFPSSEHRRSHGLESVPVLPGSGEAGVSFDLPAQADTLHSANKSRVKMRGKRRPQT
RAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAAAAPWEGGPVPGVD
TSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDD
DLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTR
EKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPR
FEHKVSNIFDDPLNAFGGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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