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Report for CCDS53098.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
53098.1 |
Public |
Mus musculus |
X |
Slc6a8 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 53098.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000114465.8 |
ENSMUSP00000110109.2 |
Accepted |
alive |
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EBI |
ENSMUST00000114467.8 |
ENSMUSP00000110111.2 |
Accepted |
alive |
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NCBI |
NM_001142809.1 |
NP_001136281.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001136281.1 |
635 |
Q8VBW1-2 |
635 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 53098.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1908 nt): ATGGCGAAAAAGAGCGCTGAAAACGGTATCTATAGCGTGTCTGGTGACGAGAAGAAGGGTCCTCTCATCG TGTCCGGGCCCGACGGTGCCCCAGCCAAGGGCGATGGCCCTGCGGGCCTGGGGGCGCCTGGCGGCCGCCT TGCAGTGCCACCGCGAGAGACTTGGACACGCCAGATGGACTTCATCATGTCGTGCGTGGGCTTCGCCGTG GGCCTCGGTAACGTGTGGCGCTTCCCCTACCTGTGCTACAAGAACGGCGGAGGTGTGTTCCTTATTCCCT ATGTCCTGATTGCCCTGGTTGGAGGAATCCCCATTTTCTTCCTGGAAATCTCATTGGGCCAGTTCATGAA GGCCGGCAGCATCAATGTCTGGAACATCTGTCCCCTATTCAAAGGTCTGGGCTATGCCTCCATGGTGATT GTCTTCTACTGCAACACTTACTACATCATGGTGCTGGCCTGGGGCTTCTATTACCTGGTCAAGTCCTTTA CTACCACTTTGCCATGGGCTACATGTGGCCACACCTGGAACACTCCTGACTGTGTGGAGATCTTCCGCCA TGAAGACTGTGCCAATGCCAGCCTGGCCAACCTCACATGTGACCAGCTTGCTGACCGCCGGTCCCCTGTC ATCGAGTTCTGGGAGAACAAAGTATTGAGGCTCTCCACGGGGCTGGAGGTTCCAGGAGCCCTCAACTGGG AGGTGACCTTGTGCCTGCTGGCCTGCTGGGTGCTGGTCTACTTCTGTGTGTGGAAGGGGGTCAAGTCAAC AGGAAAGATCGTGTACTTCACTGCTACATTCCCCTACGTGGTCCTCGTTGTGCTGCTGGTGCGAGGGGTG CTGCTGCCTGGAGCCCTGGATGGTATCATCTACTATCTCAAGCCTGACTGGTCAAAGCTAGGGTCCCCTC AGGTATGGATAGATGCTGGGACCCAGATTTTCTTCTCTTATGCCATAGGCCTGGGGGCCCTCACAGCCCT AGGCAGCTACAATCGCTTCAACAACAACTGCTACAAGGATGCCATCATCCTGGCACTCATCAACAGCGGG ACCAGCTTCTTTGCTGGCTTTGTGGTCTTCTCCATCCTGGGCTTCATGGCCACAGAGCAGGGTGTGCATA TCTCCAAGGTGGCAGAATCAGGGCCTGGTCTAGCCTTCATTGCCTACCCACGGGCTGTCACACTGATGCC TGTGGCCCCACTCTGGGCTGCCTTGTTCTTCTTCATGCTGCTGCTGCTCGGTCTGGACAGCCAGTTTGTA GGTGTGGAGGGCTTCATTACCGGGCTCCTGGATCTCCTCCCGGCCTCCTACTACTTCCGTTTCCAAAGGG AGATCTCCGTTGCTCTCTGCTGCGCCCTCTGCTTTGTCATCGATCTCTCCATGGTGACTGATGGTGGAAT GTACGTCTTCCAGCTATTTGACTACTACTCAGCTAGTGGCACTACCCTGCTTTGGCAAGCCTTTTGGGAG TGTGTAGTTGTGGCTTGGGTTTATGGAGCTGACCGCTTCATGGATGACATTGCCTGTATGATTGGGTACC GACCTTGCCCCTGGATGAAATGGTGCTGGTCCTTCTTCACCCCATTGGTCTGCATGGGCATCTTCATCTT CAACATTGTGTACTACGAGCCACTGGTCTACAACAACACCTACGTGTACCCATGGTGGGGTGAAGCTATG GGCTGGGCCTTTGCACTCTCTTCTATGCTATGTGTACCCCTCCACCTCCTGGGCTGTCTCCTCAGGGCAA AAGGAACCATGGCAGAGCGATGGCAGCACCTGACCCAGCCTATCTGGGGCCTCCATCACTTGGAATACAG AGCTCAGGATGCAGATGTCAGGGGCCTGACCACCCTGACTCCCGTGTCCGAGAGCAGCAAGGTCGTCGTG GTGGAGAGTGTCATGTAA
Translation (635 aa): MAKKSAENGIYSVSGDEKKGPLIVSGPDGAPAKGDGPAGLGAPGGRLAVPPRETWTRQMDFIMSCVGFAV GLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFMKAGSINVWNICPLFKGLGYASMVI VFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDCVEIFRHEDCANASLANLTCDQLADRRSPV IEFWENKVLRLSTGLEVPGALNWEVTLCLLACWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGV LLPGALDGIIYYLKPDWSKLGSPQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSG TSFFAGFVVFSILGFMATEQGVHISKVAESGPGLAFIAYPRAVTLMPVAPLWAALFFFMLLLLGLDSQFV GVEGFITGLLDLLPASYYFRFQREISVALCCALCFVIDLSMVTDGGMYVFQLFDYYSASGTTLLWQAFWE CVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSFFTPLVCMGIFIFNIVYYEPLVYNNTYVYPWWGEAM GWAFALSSMLCVPLHLLGCLLRAKGTMAERWQHLTQPIWGLHHLEYRAQDADVRGLTTLTPVSESSKVVV VESVM
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