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Report for CCDS51929.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51929.1 Public Mus musculus 6 Klra2 23 108 98 CCDS HistoryNCBI Gene:16633Re-query CCDS DB by CCDS ID:51929.1Re-query CCDS DB by GeneID:16633See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51929.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088867.6 ENSMUSP00000086252.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088867.6Link to Ensembl Protein Viewer:ENSMUSP00000086252.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000088867Re-query CCDS DB by Protein ID:ENSMUSP00000086252
Original member NCBI NM_001170851.1 NP_001164322.1 Updated not alive Link to Nucleotide Sequence:NM_001170851.1Link to Protein Sequence:NP_001164322.1Re-query CCDS DB by Nucleotide ID:NM_001170851Re-query CCDS DB by Protein ID:NP_001164322
Current member NCBI NM_001170851.2 NP_001164322.1 Accepted alive Link to Nucleotide Sequence:NM_001170851.2Link to Protein Sequence:NP_001164322.1Re-query CCDS DB by Nucleotide ID:NM_001170851Re-query CCDS DB by Protein ID:NP_001164322Link to BLAST:NP_001164322.1

Chromosomal Locations for CCDS 51929.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 131219989 131220028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131220109 131220264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131221807 131221905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131228206 131228309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131230078 131230220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131242793 131243014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131243896 131243985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 131245215 131245326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGAGTGAGCAGGAGGTCACTTACACAACTCTGAGATTTCATAAGTCTTCAGGGTTGCAGAACCCAGTGA
GGCCTGAGGAGACTCAAAGGCCCAGAGATGTGGGCCACAGAGAGTGTTCAGTCCCCTGGAAGTTCATTGT
GATAGTTCTTGGAATCCTCTGTTTCCTTCTGCTGGTAACTGTGGCAGTGTTGGTGATACACATTTTCCGG
GATGGACAAGAGAAACATGAACAGGAGAAAACTCTAAATAACCTCCGTCAAGAGTACCAGGTCATGAAAA
ATGACAGCTCCTTAATGGAAGAAATGTTAAGAAATAAGTCTTCAGAGTGTAAGGCCCTCAATGATAGCCT
GCACTACCTCAACAGAGAACAGAACAGATGCCTCAGGAAAACCAAGATTGTTTTAGATTGCTCACAGAAC
AAAGGCAAGCAAGTGGAAGGATACTGGTTCTGCTGTGGCATGAAATGTTATTATTTCATCATGGATGATA
AAAAATTGAAAGGATGTAAACAGATCTGCCAGGCTTACAACTTAACTCTTTTGAAGACAAATGATGAGGA
TGAATTGAAGTTCCTTAAATCCCAACTTCAAAGAAACACATACTGGATTGCACTGACACATCACGAAAGC
AAAGAGGAATCGCAACAGATTGGTGATAGACCATCTAAACCGGCTCAAGAAGAGCAAAGTTTCATTGAAG
ATTTATCCCTCTGCCATCTCATCCCTGTGGATTTCTTTCCCTGGTTCATCTTCTCTGACACAGATTGTCA
TGTTTCAGCAGCAAGGAATTCAGTACCTAATAGAGAAAAGTGTGCATATCTAAATTCATTTTCTACAGAA
GAGGATGACCGTGCTAGAAATCATGGTTGTATTTGTGAAAAGAGATTGAATAAATTCCCTATTCCAGGGA
GCTGTGCCAAGGGAAGAACTCAATCTGCTCTGCAGAGGGATGAAGATGAAAGTTAA

Translation (321 aa):
MSEQEVTYTTLRFHKSSGLQNPVRPEETQRPRDVGHRECSVPWKFIVIVLGILCFLLLVTVAVLVIHIFR
DGQEKHEQEKTLNNLRQEYQVMKNDSSLMEEMLRNKSSECKALNDSLHYLNREQNRCLRKTKIVLDCSQN
KGKQVEGYWFCCGMKCYYFIMDDKKLKGCKQICQAYNLTLLKTNDEDELKFLKSQLQRNTYWIALTHHES
KEESQQIGDRPSKPAQEEQSFIEDLSLCHLIPVDFFPWFIFSDTDCHVSAARNSVPNREKCAYLNSFSTE
EDDRARNHGCICEKRLNKFPIPGSCAKGRTQSALQRDEDES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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