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Report for CCDS51927.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51927.1 Public Mus musculus 6 Klra8 23 108 98 CCDS HistoryNCBI Gene:16639Re-query CCDS DB by CCDS ID:51927.1Re-query CCDS DB by GeneID:16639See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51927.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014476.5 ENSMUSP00000014476.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014476.5Link to Ensembl Protein Viewer:ENSMUSP00000014476.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000014476Re-query CCDS DB by Protein ID:ENSMUSP00000014476
Original member Current member NCBI NM_001101620.1 NP_001095090.1 Accepted alive Link to Nucleotide Sequence:NM_001101620.1Link to Protein Sequence:NP_001095090.1Re-query CCDS DB by Nucleotide ID:NM_001101620Re-query CCDS DB by Protein ID:NP_001095090Link to BLAST:NP_001095090.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001095090.1 266 Q60682-1 266 100% 0 0

Chromosomal Locations for CCDS 51927.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 130115536 130115671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130118963 130119066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130122038 130122177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130125050 130125268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130126223 130126312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 130128049 130128160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGAGTGAGCAGGAGGTCACTTTCCCAACTATGAGATTCCACAAGTCTTCAGGGTTGAACAGCCAGGTGA
GACTTGAGGGGACTCAGAGATCTAGAAAAGCTGGCCTAAGAGTGTGTTCAGTCCCTTGGCAGCTCATTGT
GATAGCTCTTGGAATCCTCTGTTCCCTTCGGCTGGTAATTGTTGCAGTGTTTGTGACAAAGTTTTTTCAG
TATAGTCAACACAAACAAGAAATCAATGAAACTCTCAACCACCGCCATAACTGCAGCAACATGCAAAGGG
ATTTCAACTTAAAGGAAGAAATGTTGACAAATAAGTCTATAGATTGTAGGCCAAGCTATGAACTTCTGGA
ATACATCAAAAGAGAACAGGAGAGATGGGACAGTGAAACCAAGAGTGTTTCAGATTCTTCACGAGACACA
GGCAGAGGTGTTAAATACTGGTTCTGCTATGGTACTAAATGTTATTATTTCATCATGAATAAAACTACAT
GGAGTGGATGTAAAGCGAACTGCCAGCATTACAGCGTTCCCATTGTGAAGATAGAAGATGAAGATGAACT
GAAATTCCTTCAACGCCATGTTATTCTAGAGAGTTACTGGATTGGATTGTCATATGATAAGAAAAAAAAG
GAATGGGCATGGATTCACAATGGCCAATCTAAACTTGACATGAAAATAAAGAAAATGAACTTTACGTCTA
GAGGATGTGTATTTTTATCTAAAGCAAGAATAGAAGATACTGACTGTAATACTCCCTACTACTGTATTTG
TGGGAAGAAACTGGATAAATTCCCTGATTAA

Translation (266 aa):
MSEQEVTFPTMRFHKSSGLNSQVRLEGTQRSRKAGLRVCSVPWQLIVIALGILCSLRLVIVAVFVTKFFQ
YSQHKQEINETLNHRHNCSNMQRDFNLKEEMLTNKSIDCRPSYELLEYIKREQERWDSETKSVSDSSRDT
GRGVKYWFCYGTKCYYFIMNKTTWSGCKANCQHYSVPIVKIEDEDELKFLQRHVILESYWIGLSYDKKKK
EWAWIHNGQSKLDMKIKKMNFTSRGCVFLSKARIEDTDCNTPYYCICGKKLDKFPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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