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Report for CCDS51765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51765.1 Public Mus musculus 6 Zfp467 23 108 98 CCDS HistoryNCBI Gene:68910Re-query CCDS DB by CCDS ID:51765.1Re-query CCDS DB by GeneID:68910See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114558.7 ENSMUSP00000110205.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114558.7Link to Ensembl Protein Viewer:ENSMUSP00000110205.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114558Re-query CCDS DB by Protein ID:ENSMUSP00000110205
Original member Current member EBI ENSMUST00000114559.7 ENSMUSP00000110206.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114559.7Link to Ensembl Protein Viewer:ENSMUSP00000110206.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114559Re-query CCDS DB by Protein ID:ENSMUSP00000110206
Original member Current member NCBI NM_001085416.1 NP_001078885.1 Accepted alive Link to Nucleotide Sequence:NM_001085416.1Link to Protein Sequence:NP_001078885.1Re-query CCDS DB by Nucleotide ID:NM_001085416Re-query CCDS DB by Protein ID:NP_001078885Link to BLAST:NP_001078885.1
Original member Current member NCBI NM_001355746.1 NP_001342675.1 Accepted alive Link to Nucleotide Sequence:NM_001355746.1Link to Protein Sequence:NP_001342675.1Re-query CCDS DB by Nucleotide ID:NM_001355746Re-query CCDS DB by Protein ID:NP_001342675Link to BLAST:NP_001342675.1

Chromosomal Locations for CCDS 51765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 48439284 48439357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 48441947 48442060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 48442625 48442738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 48443412 48443445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (336 nt):
ATGAGAGAGACCCTGGAGGCCCTGAACTCCTTGGGATTCTCAGTGGGACAGCCAGAGATGGCTCCCCAGA
GTGAGCCCAGGGATGGGTTCAGTAATGCCCAGGAGAAGATGTCATCCAGAGGAGAGAGCACACTGCACTC
CTGCTCAGGGCATGAGACTCCTGGCCAGAAAGAAGGCATCCACACAGAACAAGCTGAAGCTCCTTGTATG
GGCAGCCAGGCCAGTACCCCACAGAAGGCCGAACCTGCAGGCTCTGTCCCAGTCCTTTTCCCACTCCTGA
CTTGGGTCAGTTGGCTGTTACGTACAAACTGGAGCCAGGGACTCCGGGAGCACTAG

Translation (111 aa):
MRETLEALNSLGFSVGQPEMAPQSEPRDGFSNAQEKMSSRGESTLHSCSGHETPGQKEGIHTEQAEAPCM
GSQASTPQKAEPAGSVPVLFPLLTWVSWLLRTNWSQGLREH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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