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Report for CCDS51487.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51487.1 Public Mus musculus 5 Cpeb2 23 108 98 CCDS HistoryNCBI Gene:231207Re-query CCDS DB by CCDS ID:51487.1Re-query CCDS DB by GeneID:231207See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51487.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169035.7 ENSMUSP00000125857.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169035.7Link to Ensembl Protein Viewer:ENSMUSP00000125857.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169035Re-query CCDS DB by Protein ID:ENSMUSP00000125857
Original member Current member NCBI NM_001177379.2 NP_001170850.1 Accepted alive Link to Nucleotide Sequence:NM_001177379.2Link to Protein Sequence:NP_001170850.1Re-query CCDS DB by Nucleotide ID:NM_001177379Re-query CCDS DB by Protein ID:NP_001170850Link to BLAST:NP_001170850.1

Chromosomal Locations for CCDS 51487.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 43233463 43235088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43237307 43237588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43244586 43244676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43261734 43261784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43268869 43268892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43277431 43277601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43278604 43278693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43281110 43281228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43281371 43281485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43283937 43284118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 43285719 43285946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2979 nt):
ATGCGGGACTTCGGGTTCGGGGTGCTGCACACTGCCCTGCTGCGCAGCGGCAGCCCACGATCCTCGCCCG
GCGGCAGCGCCTACCGGCCCTTCGCCGCCGGGCCGCCCGCCACGCCCTTCGGCCCGCTGTCGCCGCCGCC
GTTGCCTGTCACCGGCTTCTCCGAGGCCGCCTCCCCCTTCGCCATCCCCTCGGGCGGCGGCGCGGCCAGC
TCAGCCGCAGCTTCCTCTTCCTCCCCGCTCGTGGCGCATCCCCAGGCCGTGCAGGATGAGCTACTGCTCG
GGCTGACACAGCAGCCGACGAGGCCGCTCTCGGGGGCGGCGGCCGCAGAGCAGCTCCCCAGCCACCACCC
CGGCGGCGGCACGAACGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTCAAACCGAGTCTGCACCAC
CCCTCCTCCTCCTCCGCCTCCTCCTGCTGCTGCTGCCGCACCTCCTCCCCGCAGGACTTCAGTAAGCGGC
AGCAGCAGCAGCTGAGCAGCCAGAAGAGGAAAGAGTTGAGCCCGCCACACCGTCCCCACCCTCCGGACGC
GAAGCCGCCGCCGCCGCCGCCGCCGCTCCACTGCCCCGGCCGCTTCAGCCCAACACCGCCAACGCCGCCA
CCACCGCCCGGGCCGCTCCTGCAGTCGGCGCCGCTCGCCCAGCGCTCTCAGCCGTTCAGCCTCCCGCACA
CGCAGCACCTCCCGCCGCAGGACTTCGCCCAGCGGCAGCGCCCGGTCGACCTGCCCCAGCTCCCGCAGCT
CCCGCCCTCGCCGCCCGCAGCTCCGCGGCGCCGCCACGGAGGCGCGGGAAGCCCTCGCCAGACCCCGGCC
GCGGGCGAGGGCAGCGCCGCCGAGCCCCCCAATGCGGGCTTGCCCCCCTCGACGCCGCCGGTGAACCCCG
CGCCGGGCTCCATGGAGTCGCCCAACCACCCTCTGCTCAACAGCCCCAGCACCCTCCTGCCCGGCGCGGC
GCTCGGCACCAGCGCCTTCAGCAGCCTGCAGAGCCCGGACCTGCCGCACCCCGGCGGCGGCGGGGGCGGG
GGACCCCCCGGAGGGGGAGGCGGCTCCGCGTCTCCCCCACCGCTGCCCGGCTTCGGCACCCCCTGGTCGG
TGCAGACCGCGTCGCCGCCGCCGCCCCAGCCTCCGCCGGCGACCCAGCAGCAGCCACCCCAGCAGCCGCA
GCCGCCCCAGCAGCCGCCGCAACCACAGCCCCCGGGCTCCTCGGCTGCCACCCCGGGCAGCGGCGGCGGC
GCGGGCGGCTCTCTGAGCGCCATGCCGCCGCCCAGCCCGGACTCGGAGAACGGCTTCTACCCCGGGCTGC
CATCGTCCATGAACCCGGCCTTCTTCCCGAGCTTCTCGCCGGTGTCGCCGCACGGCTGCGCGGGGCTCAG
CGTGCCGGCCGGCGGTGGCGGCGGCGGCGGCGGCTTCGGCGGCCCGTTCTCTGCTCCCACGGTGCCCGCG
CCGCCCGCCATGAATTTACCTCAACAGCAGCCGCCGGCGGCGGCGCCGCAGCAGCCGCAGAGCCGGAGGT
CACCCGTCAGCCCGCAGCTGCAGCAGCAGCACCAGGCTGCCGCAGCCGCCTTCCTGCAGCAGAGGAACTC
GTACAACCACCACCAGCCTCTTCTGAAACAGTCTCCTTGGAGCAACCATCAGAACAGCGGTTGGGGCACT
GCGAGCATGTCCTGGGGAGCAATGCACGGCAGAGATCACCGCAGGAGCGGCAACATGGGGATCCCAGGGA
CTATGAATCAGATATCTCCGCTGAAGAAGCCGTTCTCGGGTAATGTTATAGCACCACCGAAATTCACTCG
CTCTACTCCATCACTGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGGACAGACAACAATAGTAAC
ACACTCTTACCCTTACAGGATCGAAGTAGAATGTATGATAGCTTGAATATGCACTCTCTGGAAAATTCCC
TTATTGATATCATGAGAGCAGAGCACGATCCTCTCAAGGGTCGTCTGAGCTATCCACATCCAGGAACCGA
CAATCTGTTAATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGCTCTTCCCTATTTCCAATAGAT
GATAGCTTGTTGGATGATGGTCACAGTGATCAAGTTGGTGTTTTAAATTCACCAACATGTTATTCAGCTC
ATCAAAATGGAGAACGAATTGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGGCTTCCTCCGGATATTGA
TGAAGATGAGATCACTGCCAGCTTCCGAAGATTTGGACCTTTGGTAGTAGATTGGCCCCACAAAGCAGAA
AGTAAATCCTATTTTCCACCAAAAGGCTATGCATTCCTCCTCTTTCAAGAAGAGAGCTCAGTCCAGGCAC
TCATTGACGCTTGCATTGAAGAAGATGGAAAGCTCTACTTGTGTGTTTCCAGCCCTACTATCAAAGACAA
ACCTGTTCAAATCCGTCCTTGGAATTTAAGTGATAGTGATTTCGTCATGGATGGTTCTCAGCCTTTGGAT
CCCCGAAAAACAATTTTTGTTGGAGGTGTTCCTAGGCCACTAAGGGCTGTGGAACTTGCTATGATCATGG
ACCGGCTGTATGGTGGTGTGTGTTACGCAGGAATTGATACAGATCCAGAACTCAAATACCCAAAAGGTGC
TGGGCGAGTCGCTTTCTCCAATCAGCAGAGCTACATTGCTGCCATCAGTGCTCGATTTGTTCAGCTTCAG
CACGGTGACATTGATAAACGTGTGGAGGTGAAGCCATATGTGCTAGATGACCAGATGTGTGACGAGTGCC
AGGGTGCACGCTGTGGTGGGAAATTTGCCCCCTTTTTCTGTGCCAATGTCACCTGCCTGCAGTATTACTG
TGAGTTTTGTTGGGCAAATATCCACTCTCGTGCAGGACGCGAGTTCCATAAGCCATTGGTGAAGGAAGGT
GCTGATCGCCCACGTCAGATCCACTTCCGCTGGAACTAA

Translation (992 aa):
MRDFGFGVLHTALLRSGSPRSSPGGSAYRPFAAGPPATPFGPLSPPPLPVTGFSEAASPFAIPSGGGAAS
SAAASSSSPLVAHPQAVQDELLLGLTQQPTRPLSGAAAAEQLPSHHPGGGTNAGVTHLLPSQDFKPSLHH
PSSSSASSCCCCRTSSPQDFSKRQQQQLSSQKRKELSPPHRPHPPDAKPPPPPPPLHCPGRFSPTPPTPP
PPPGPLLQSAPLAQRSQPFSLPHTQHLPPQDFAQRQRPVDLPQLPQLPPSPPAAPRRRHGGAGSPRQTPA
AGEGSAAEPPNAGLPPSTPPVNPAPGSMESPNHPLLNSPSTLLPGAALGTSAFSSLQSPDLPHPGGGGGG
GPPGGGGGSASPPPLPGFGTPWSVQTASPPPPQPPPATQQQPPQQPQPPQQPPQPQPPGSSAATPGSGGG
AGGSLSAMPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCAGLSVPAGGGGGGGGFGGPFSAPTVPA
PPAMNLPQQQPPAAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLLKQSPWSNHQNSGWGT
ASMSWGAMHGRDHRRSGNMGIPGTMNQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSN
TLLPLQDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNARSYGRRRGRSSLFPID
DSLLDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAE
SKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLD
PRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQ
HGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEG
ADRPRQIHFRWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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