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Report for CCDS51372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51372.1 Public Mus musculus 4 Zfp987 23 108 98 CCDS HistoryNCBI Gene:626316Re-query CCDS DB by CCDS ID:51372.1Re-query CCDS DB by GeneID:626316See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51372.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091878.5 ENSMUSP00000089493.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091878.5Link to Ensembl Protein Viewer:ENSMUSP00000089493.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000091878Re-query CCDS DB by Protein ID:ENSMUSP00000089493
Original member Current member NCBI NM_001037926.2 NP_001033015.1 Accepted alive Link to Nucleotide Sequence:NM_001037926.2Link to Protein Sequence:NP_001033015.1Re-query CCDS DB by Nucleotide ID:NM_001037926Re-query CCDS DB by Protein ID:NP_001033015Link to BLAST:NP_001033015.1

Chromosomal Locations for CCDS 51372.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 146117880 146117909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 146121884 146122010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 146124157 146125901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1902 nt):
ATGAGTGTGTGTCTGGTAAATACACCACAGGGTCTGTTAACTTTCAAGGACGTGGCCTTGGACTTCTCAC
TGGAGGAATGGGAATGTCTCAGTTTTGCTCAGAGGTCATTGTACATGGATGTGATGTTGGAGAATTACAA
CAATCTGTTGTTTGTGGAAAATCATTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCAG
TACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTAGCAATGTCATTC
TTGAATCCCTCCAGTGTACACCTTACAAAACTAATCACAGCTCTGATGCTCTTCAATTCTCGAACCAAAA
AAGACTTAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTTTAAGTTTGTTT
TCTACCATTAGTCTCAATCAAGGAATTAACATGCAGAAGAAAAAACACAACCGAAATGCAGAATTAGACA
AGATTTTTGTTTCTAAACATAAAGTCATGGTGAAAAAAGACAATATTGCAGGGAACCCTTACAAATGTAG
TGAATTTCACAAATATCTTACCCAGAGAGAAAACCTACAAAGTCAGCAGAGAATTTATCATGGAAAGAAA
CCTTACAAAAGTAGTAAAAGTGACAAATGCTTTACCCATCAGATCCATCTTAGTATTCATCAGGAAATTC
ATACAGAAGAGAAAATTTACAAATGTAGTGAATGTGACAAATGTTTTAAAAACAAATTCAATCTTACTAT
GCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAAACAA
TCCAATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAAT
GCTTTACCCAAGAATCCTATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAG
TGAATGTGGCAAATGCTTTACTGAAAAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAA
CCTTACAAATGCAGTGAATGTGACAAATGCTTTACCCAACAATCCCATCTTAGTATTCATCAGAGAATTC
ATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCCAACAATCCAATCTTAGTAT
TCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGGCAAATGCTTTACTGAAAAA
AGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGGCAAAT
GCTTTACTGAAAAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAA
TGAATGTGGCAAATGCTTTACTGAAAAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAA
CCTTACAAATGCAGTGAATGTGGCAAATGCTTTACTGTAAAAAGCAGTCTGAGAATTCATCAGAAAATTC
ATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAAACCATCCCATCTTAGTAT
TCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGAAAAATGCTTTAATGAAAAA
AACATTCTGAAAATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGTAGTGAATGTGACAAAT
GCTTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTCATACAGGAAAGAAACCTTACAAATGTAG
TGAATGTGACAAATGCTTTACCCAGAAATCCCATCTTAGTATTCATCAGAAAATTCATACAGGAGAGAAA
CCTTACAAATAG

Translation (633 aa):
MSVCLVNTPQGLLTFKDVALDFSLEEWECLSFAQRSLYMDVMLENYNNLLFVENHCIRGKNGKVLDQDSQ
YIVHEHMNIQEKSSKWDKLSNVILESLQCTPYKTNHSSDALQFSNQKRLKPRNTKEVCKYNDSVNSLSLF
STISLNQGINMQKKKHNRNAELDKIFVSKHKVMVKKDNIAGNPYKCSEFHKYLTQRENLQSQQRIYHGKK
PYKSSKSDKCFTHQIHLSIHQEIHTEEKIYKCSECDKCFKNKFNLTMHQRIHTGEKPYKCSECDKCFTKQ
SNLSIHQRIHTGEKPYKCSECDKCFTQESYLSIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEK
PYKCSECDKCFTQQSHLSIHQRIHTGEKPYKCSECDKCFTQQSNLSIHQRIHTGEKPYKCSECGKCFTEK
SSLRIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEKPYKCNECGKCFTEKSSLRIHQRIHTGEK
PYKCSECGKCFTVKSSLRIHQKIHTGEKPYKCSECDKCFTKPSHLSIHQRIHTGEKPYKCSECEKCFNEK
NILKIHQRIHTGERPYKCSECDKCFSRKFHLGIHQRIHTGKKPYKCSECDKCFTQKSHLSIHQKIHTGEK
PYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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