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Report for CCDS51257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51257.1 Public Mus musculus 4 Osbpl9 23 108 98 CCDS HistoryNCBI Gene:100273Re-query CCDS DB by CCDS ID:51257.1Re-query CCDS DB by GeneID:100273See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51257.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000160271.7 ENSMUSP00000124112.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160271.7Link to Ensembl Protein Viewer:ENSMUSP00000124112.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160271Re-query CCDS DB by Protein ID:ENSMUSP00000124112
Original member Current member NCBI NM_001134791.2 NP_001128263.1 Accepted alive Link to Nucleotide Sequence:NM_001134791.2Link to Protein Sequence:NP_001128263.1Re-query CCDS DB by Nucleotide ID:NM_001134791Re-query CCDS DB by Protein ID:NP_001128263Link to BLAST:NP_001128263.1

Chromosomal Locations for CCDS 51257.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 109062258 109062332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109062465 109062600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109063366 109063457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109064563 109064641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109065624 109065764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109065865 109065928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109066128 109066238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109066915 109066999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109068363 109068534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109071943 109072028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109072814 109072932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109073037 109073149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109083089 109083248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109086327 109086431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109087395 109087485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109098503 109098553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109099921 109099950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109101116 109101163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109102497 109102592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 109117895 109117921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1881 nt):
ATGGCTCTCCTGCTGGCCGCTTGCGGAGGTTTGGATTCAGGATTCATCCCCAGTGTCCAAGACTTTGATA
AGAAACTTACCGAGGCTGACGCGTACCTGCAGATCTTGATAGAACAATTAAAGCTTTTTGATGACAAGCT
TCAAAATTGTAAAGATGATGAACAGAGAAAGAAAGTTGAAACTCTCAAAGACACAACAAATAGCATGGTA
GAATCAATTAAACACTGCATTGTGTTGCTACAGATTGCTAAAAGTACTATTAATCCTGTAGATGCAATAT
ACCAGCCTAGTCCCTTGGAACCTGTGATCAGCACAATGCCTTCCCAGACTGCCTTACCTCCAGAACCCGC
TCAGTTGTGTAAGTCAGAGCAGCGTCCATCTTCCTTACCTGTTGGACCTGTGTTAGCTACCTTGGGACAT
CATCAGACTCCAACACCAAATAGTACAGGCAGTGGGAACTCACCACCTAGCAGCAGTCTGACTCCTCCCA
GCCATGTCAACTTGTCTCCAAATACAGTCCCAGAGTTCTCTTACTCTAGCAGTGAAGATGAGTTCTATGA
TGCTGATGAATTCCATCAAAGTGGCTCGTCCCCAAAGCGCTTAATAGATTCTTCTGGATCTGCCTCAGTC
TTGACACACAGCAGCTCCGGAAATAGCTTAAAACGCCCAGATACCACAGAGTCTCTGAATTCCTCCATGT
CCAATGGCACAAGCGATGCTGATCTTTTTGACTCACATGACGACAGAGATGATGATGGGGAGGCTGGGTC
AGTGGAGGAGCACAAGAGCGTTATCATGCACCTCTTATCACAAGTCAGGCTGGGGATGGACCTCACAAAG
GTAGTTCTTCCAACGTTTATTCTCGAGAGAAGATCTCTGTTAGAAATGTATGCAGACTTTTTCGCACATC
CAGACCTGTTCGTGAGCATTAGTGATCAGAAGGATCCCAGGGATCGAATGGTTCAGGTTGTGAAATGGTA
CCTCTCGGCCTTCCATGCAGGAAGGAGAGGATCGGTGGCCAAAAAGCCGTACAATCCTATTTTGGGTGAG
ATCTTTCAGTGTCACTGGACGTTGCCGAATGATACTGAAGAGAACGCAGAGCTCGTTTCAGAAGGGCCGG
TTCCCTGGGTTTCTAAGAACAGTGTAACATTTGTGGCTGAGCAAGTTTCCCACCATCCGCCCATTTCAGC
CTTTTATGCTGAGTGTTTTAACAAGAAGATACAATTCAATGCTCATATCTGGACTAAATCAAAATTCCTT
GGGATGTCAATTGGGGTACACAACATAGGTCAGGGCTGTGTCTCGTGTCTGGAGTACGATGAGCACTACA
TCCTCACGTTCCCCAATGGCTATGGAAGGTCTATCCTGACAGTGCCCTGGGTGGAATTGGGAGGAGAATG
CAATATCAACTGCTCCAAAACGGGTTACAGCGCAAACATCGTCTTCCACACTAAGCCTTTCTATGGGGGC
AAGAAGCACAGAATTACTGCAGAGATTTTTTCTCCGAATGACAAGAAATCCTTCTGCTCAATTGAAGGGG
AATGGAATGGTATCATGTATGCAAAATACGCAACAGGGGAAAACACTGTCTTTGTAGACACCAAGAAATT
GCCTATAATCAAGAAAAAGGTGAGGAAGTTGGAAGATCAGAATGAGTATGAGTCCCGCAGCCTTTGGAAG
GATGTCACTTTCAATTTAAAAATCAGAGACATTGATGCAGCAACGGAAGCAAAGCACAGACTTGAAGAAA
GACAAAGAGCAGAAGCCCGAGAAAGGAAGGAGAAGGAAATTCAGTGGGAGACGAGGCTCTTTCACGAGGA
TGGCGAATGCTGGGTTTACGATGAGCCTTTACTGAAGCGTCTTGGTGCTGTGAAGCATTAG

Translation (626 aa):
MALLLAACGGLDSGFIPSVQDFDKKLTEADAYLQILIEQLKLFDDKLQNCKDDEQRKKVETLKDTTNSMV
ESIKHCIVLLQIAKSTINPVDAIYQPSPLEPVISTMPSQTALPPEPAQLCKSEQRPSSLPVGPVLATLGH
HQTPTPNSTGSGNSPPSSSLTPPSHVNLSPNTVPEFSYSSSEDEFYDADEFHQSGSSPKRLIDSSGSASV
LTHSSSGNSLKRPDTTESLNSSMSNGTSDADLFDSHDDRDDDGEAGSVEEHKSVIMHLLSQVRLGMDLTK
VVLPTFILERRSLLEMYADFFAHPDLFVSISDQKDPRDRMVQVVKWYLSAFHAGRRGSVAKKPYNPILGE
IFQCHWTLPNDTEENAELVSEGPVPWVSKNSVTFVAEQVSHHPPISAFYAECFNKKIQFNAHIWTKSKFL
GMSIGVHNIGQGCVSCLEYDEHYILTFPNGYGRSILTVPWVELGGECNINCSKTGYSANIVFHTKPFYGG
KKHRITAEIFSPNDKKSFCSIEGEWNGIMYAKYATGENTVFVDTKKLPIIKKKVRKLEDQNEYESRSLWK
DVTFNLKIRDIDAATEAKHRLEERQRAEARERKEKEIQWETRLFHEDGECWVYDEPLLKRLGAVKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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