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Report for CCDS4984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4984.1 Public Homo sapiens 6 FILIP1 24 110 108 CCDS HistoryNCBI Gene:27145Re-query CCDS DB by CCDS ID:4984.1Re-query CCDS DB by GeneID:27145See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4984.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000237172.12 ENSP00000237172.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000237172.12Link to Ensembl Protein Viewer:ENSP00000237172.7Re-query CCDS DB by Nucleotide ID:ENST00000237172Re-query CCDS DB by Protein ID:ENSP00000237172
Original member Current member NCBI NM_015687.5 NP_056502.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015687.5Link to Protein Sequence:NP_056502.1Re-query CCDS DB by Nucleotide ID:NM_015687Re-query CCDS DB by Protein ID:NP_056502Link to BLAST:NP_056502.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056502.1 1213 Q7Z7B0-1 1213 100% 0 0

Chromosomal Locations for CCDS 4984.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 75308691 75308897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75312397 75315202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75353539 75353717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75362744 75362917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75414697 75414972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3642 nt):
ATGAGATCTCGAAACCAAGGTGGTGAAAGTGCATCTGATGGGCATATCTCCTGTCCCAAGCCCTCCATCA
TCGGCAATGCTGGTGAAAAAAGTCTCTCAGAAGATGCAAAAAAGAAGAAGAAATCAAATAGGAAGGAGGA
TGATGTCATGGCCTCAGGAACTGTCAAACGACACCTAAAAACATCTGGAGAATGTGAACGAAAAACTAAG
AAATCCCTGGAGTTATCCAAAGAAGACCTCATCCAACTACTCAGTATAATGGAAGGGGAGTTGCAGGCCA
GAGAAGATGTGATCCACATGCTGAAGACAGAGAAAACCAAGCCTGAGGTTCTGGAGGCTCATTACGGGTC
TGCGGAGCCAGAGAAAGTGCTGCGGGTCCTGCACCGAGATGCCATTCTTGCCCAGGAGAAATCCATAGGA
GAAGATGTCTATGAGAAACCGATTTCAGAGCTGGACAGACTTGAGGAAAAACAGAAAGAAACCTACCGGC
GCATGCTAGAGCAGCTGTTGCTGGCCGAGAAGTGTCATAGGCGCACCGTATACGAGTTAGAGAACGAGAA
GCATAAACACACTGACTACATGAACAAGAGCGACGACTTCACCAACCTGCTGGAGCAGGAGCGGGAGAGG
TTAAAAAAGCTCCTTGAACAAGAAAAGGCTTATCAAGCCCGCAAAGAAAAGGAAAATGCTAAACGACTCA
ATAAACTAAGAGATGAGCTTGTTAAACTCAAATCCTTTGCACTCATGCTGGTGGATGAAAGACAAATGCA
CATTGAACAACTTGGCCTGCAAAGCCAGAAAGTACAGGATCTTACTCAGAAGCTGAGGGAAGAAGAAGAG
AAGCTCAAAGCCATTACTTCCAAATCCAAAGAAGACAGACAGAAATTGCTCAAGTTAGAAGTGGACTTTG
AACACAAGGCTTCGAGGTTTTCTCAAGAGCATGAAGAGATGAACGCTAAACTGGCTAATCAAGAGTCTCA
CAATAGGCAACTTAGACTCAAGCTGGTTGGCTTAACCCAAAGAATCGAGGAGCTAGAAGAGACCAACAAA
AATCTGCAGAAGGCAGAGGAAGAACTTCAAGAATTAAGAGATAAAATTGCCAAAGGAGAATGTGGAAACT
CTAGCCTCATGGCAGAAGTGGAAAATCTTCGAAAGCGTGTGCTTGAAATGGAAGGTAAAGATGAGGAGAT
CACTAAAACTGAATCCCAGTGTAGGGAATTGAGGAAGAAGCTGCAAGAGGAAGAACACCATAGTAAGGAG
CTCAGACTTGAAGTTGAGAAGCTACAGAAGAGAATGTCTGAACTAGAGAAATTGGAAGAAGCATTTAGCA
AGAGTAAATCTGAGTGCACCCAGCTACATTTAAATCTGGAGAAAGAAAAGAACTTAACCAAAGACCTGCT
AAATGAATTGGAGGTGGTCAAGAGTCGAGTTAAAGAATTGGAATGTTCTGAAAGTAGATTGGAAAAGGCT
GAATTAAGCCTAAAAGATGATCTTACCAAGTTGAAGTCATTTACCGTGATGCTGGTTGATGAAAGGAAAA
ATATGATGGAAAAAATAAAACAAGAAGAGAGAAAAGTGGATGGACTCAATAAAAATTTTAAGGTGGAACA
AGGAAAAGTTATGGATGTAACTGAAAAACTAATTGAAGAAAGTAAGAAACTTTTAAAACTAAAATCTGAA
ATGGAGGAAAAAGTATACAACTTGACAAGAGAAAGAGATGAGTTGATAGGCAAATTGAAAAGTGAAGAAG
AAAAATCCTCTGAATTAAGCTGCAGTGTTGACTTACTAAAGAAGAGACTTGATGGTATAGAGGAAGTGGA
AAGAGAAATAACAAGAGGAAGGTCACGAAAAGGGTCTGAGCTCACCTGCCCGGAAGATAATAAGATTAAG
GAACTAACACTTGAAATTGAGAGACTGAAGAAACGTCTCCAACAATTGGAAGTGGTCGAAGGGGATTTGA
TGAAGACAGAAGATGAGTATGATCAGCTGGAACAGAAATTTAGAACTGAGCAGGATAAGGCTAACTTCCT
CTCTCAACAACTAGAGGAGATCAAGCACCAAATTGCCAAGAATAAAGCAATAGAGAAGGGTGAGGTTGTG
AGCCAGGAAGCTGAACTGAGACACAGATTTCGGTTGGAAGAAGCTAAAAGTCGAGACTTAAAAGCCGAAG
TACAAGCTCTTAAAGAGAAGATTCACGAATTAATGAACAAAGAAGATCAGCTTTCTCAGCTCCAGGTAGA
TTATTCTGTACTTCAACAAAGATTTATGGAAGAAGAAAATAAGAACAAAAACATGGGGCAGGAGGTTCTC
AATCTGACCAAAGAGTTGGAGCTTTCCAAGCGCTACAGCAGAGCTCTTAGGCCCAGTGTGAATGGAAGAA
GAATGGTGGATGTTCCTGTGACGTCAACTGGAGTCCAAACTGATGCAGTCAGCGGTGAAGCAGCAGAGGA
AGAAACGCCAGCTGTATTCATACGGAAATCCTTCCAGGAAGAAAATCATATTATGAGTAATCTTCGGCAG
GTGGGATTGAAGAAACCCGTGGAAAGATCTTCTGTTCTAGACAGGTATCCTCCAGCAGCAAATGAGCTCA
CTATGAGAAAGTCTTGGATTCCATGGATGAGAAAGAGGGAAAACGGCCCCTCCATCACTCAGGAGAAAGG
GCCCCGAACAAATTCCAGTCCAGGGCACCCAGGAGAGGTAGTCCTTTCACCAAAGCAGGGCCAGCCCCTG
CATATTCGAGTGACACCAGACCACGAGAACAGCACTGCGACTTTGGAGATAACAAGCCCGACATCTGAAG
AATTTTTTTCTAGTACCACTGTCATTCCTACCTTAGGGAATCAGAAACCAAGAATAACCATTATTCCATC
ACCAAACGTTATGCCTCAAAAACAAAAAAGTGGAGATACTACTCTTGGCCCAGAACGAGCCATGTCCCCA
GTCACAATTACTACATTTTCCAGAGAGAAGACTCCAGAAAGTGGAAGAGGCGCATTTGCAGACAGGCCCA
CATCCCCTATTCAGATAATGACGGTGTCTACATCAGCAGCACCAGCTGAGATTGCAGTTTCTCCCGAATC
CCAGGAAATGCCCATGGGACGGACAATCCTCAAAGTCACCCCAGAAAAACAGACTGTTCCAACTCCAGTA
CGGAAATACAACTCCAATGCCAATATCATAACCACAGAGGACAATAAAATTCACATTCACTTAGGGTCTC
AGTTTAAACGGTCCCCTGGGACTTCAGGTGAAGGAGTCAGTCCAGTTATTACTGTCCGACCAGTAAACGT
GACAGCCGAAAAGGAGGTTTCCACCGGCACTGTCCTTCGCTCTCCCAGGAATCACCTCTCCTCACGGCCT
GGTGCAAGCAAAGTGACGAGCACTATCACCATAACACCGGTCACAACGTCATCTGCTCGAGGAACCCAGT
CAGTGTCAGGACAAGACGGGTCATCCCAGCGGCCTACACCCACCCGCATTCCTATGTCAAAAGGTATGAA
AGCAGGAAAGCCAGTAGTGGCAGCCCCAGGAGCAGGAAATCTGACCAAATTCGAGCCTCGAGCTGAGACT
CAGTCTATGAAAATAGAGCTGAAGAAATCTGCAGCCAGCAGCACCACCTCTCTCGGAGGGGGGAAGGGCT
GA

Translation (1213 aa):
MRSRNQGGESASDGHISCPKPSIIGNAGEKSLSEDAKKKKKSNRKEDDVMASGTVKRHLKTSGECERKTK
KSLELSKEDLIQLLSIMEGELQAREDVIHMLKTEKTKPEVLEAHYGSAEPEKVLRVLHRDAILAQEKSIG
EDVYEKPISELDRLEEKQKETYRRMLEQLLLAEKCHRRTVYELENEKHKHTDYMNKSDDFTNLLEQERER
LKKLLEQEKAYQARKEKENAKRLNKLRDELVKLKSFALMLVDERQMHIEQLGLQSQKVQDLTQKLREEEE
KLKAITSKSKEDRQKLLKLEVDFEHKASRFSQEHEEMNAKLANQESHNRQLRLKLVGLTQRIEELEETNK
NLQKAEEELQELRDKIAKGECGNSSLMAEVENLRKRVLEMEGKDEEITKTESQCRELRKKLQEEEHHSKE
LRLEVEKLQKRMSELEKLEEAFSKSKSECTQLHLNLEKEKNLTKDLLNELEVVKSRVKELECSESRLEKA
ELSLKDDLTKLKSFTVMLVDERKNMMEKIKQEERKVDGLNKNFKVEQGKVMDVTEKLIEESKKLLKLKSE
MEEKVYNLTRERDELIGKLKSEEEKSSELSCSVDLLKKRLDGIEEVEREITRGRSRKGSELTCPEDNKIK
ELTLEIERLKKRLQQLEVVEGDLMKTEDEYDQLEQKFRTEQDKANFLSQQLEEIKHQIAKNKAIEKGEVV
SQEAELRHRFRLEEAKSRDLKAEVQALKEKIHELMNKEDQLSQLQVDYSVLQQRFMEEENKNKNMGQEVL
NLTKELELSKRYSRALRPSVNGRRMVDVPVTSTGVQTDAVSGEAAEEETPAVFIRKSFQEENHIMSNLRQ
VGLKKPVERSSVLDRYPPAANELTMRKSWIPWMRKRENGPSITQEKGPRTNSSPGHPGEVVLSPKQGQPL
HIRVTPDHENSTATLEITSPTSEEFFSSTTVIPTLGNQKPRITIIPSPNVMPQKQKSGDTTLGPERAMSP
VTITTFSREKTPESGRGAFADRPTSPIQIMTVSTSAAPAEIAVSPESQEMPMGRTILKVTPEKQTVPTPV
RKYNSNANIITTEDNKIHIHLGSQFKRSPGTSGEGVSPVITVRPVNVTAEKEVSTGTVLRSPRNHLSSRP
GASKVTSTITITPVTTSSARGTQSVSGQDGSSQRPTPTRIPMSKGMKAGKPVVAAPGAGNLTKFEPRAET
QSMKIELKKSAASSTTSLGGGKG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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