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Report for CCDS49286.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
49286.1 |
Public |
Mus musculus |
13 |
Spata31d1d |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 49286.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000052978.5 |
ENSMUSP00000128200.1 |
Accepted |
alive |
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NCBI |
NM_177711.3 |
NP_808379.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 49286.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3744 nt): ATGAAAAAGGTTCTCTCCATTCTCAATAGCTCCATTCTAACTAGCGCTAAGGAATCATGGTTGAGCATTG GCTCCATCTTCGTGGACATTTACCCCAAATGCATCATTCTGAGTGTACTTGGGCTGCTGTTTTTGTTCCT AAGGTACCTGATACTGAAACCCTTCTTACCCACACAGACCAGCCAAGGAGTCAGGAAGCAACAAGGCAGA GCTAAGCGGGAAAGGAGAGCGTCATTTAATGAATTCAGAAACTTCCATGGAGAAGCTCGGGAGCGGAGGA AGCTGCAAGCTGTTGTGCAAAGCCCCTGTGGGCAGCTCTACGACCCCTTCTACTTCCGGCAAGCGCTTTG TCAGGATCCCCGTTGTGATGTGTGCAATGGAGCCACAGTGAAGGTCAGGCGACTGCTCTCATGGGCCAGC CTAGAAGACTGCTCTGCCTCTGCATCCAGTATGGCTTCCATGGCCTCCACAGCTTCTGTGACTGAGGCCT CATTCACTCTCTCTTCTTCCCTCTCCCCAAGCCCTTCGGGATATCAGCTCTCATCTTTTTCAGTTGCACC TTCTCCCCCTCCTCCCTCCATTCTCTCAACTAGCACGTTCACCCCCTTGGAAGACACCCTTTTGGGCACA CCACAGGGTGACTCTCTGCCACCAGAGCCCACTCTCACAAGCACTGGTTTCCCACTGGATCACCTCCTAC CTCACCCACTTCCCAAGTCTCCTTCCGTGGCACATCCTGCAGCTCAGCAAACAGAAGGGCCTTTAAGACC GGAAGACATTCTCTCCTTGGCTGGCAGCCATGGTGACCAGTTTCTCCATGCAACAACAACTTGTGATGCC TTGCCAGTGTCCTACCAGCAGCAGCCTGGTGCTCAGAGCTCCTCCCCATCCCAGTTAAAATGCTTAGTTA ACCAAGAGATACCCAACCACTGCTCTTCTGAAGATTTTTGGCGGGGACAAGCCTCACCCCATTTCACAGT GCCCCAGAAAGTCCTGAAAATACTTGAGAGACAAGAGGAAAGCCAGGCTGACGTTCTTACACTGAAGGAC AGGGAAGGAGAAGCAGAACCAACTGCTGAGCAGAACCTAGGAGCCTCCTTTCCCCTAGGGGGCAGCAGAG TCATACTCAGCGAGCTCAATCCTCAGCAGGGGCTTGCTCAAGTGCAGAGCTCTGGGGGCCAGTTAGAGGC CATGCCCATGCAGCACTTCTGGGGCCTCCCTTATCTCCACAGCGAGTCCATGAGCTGTATCACTACACTG TCATCTCACTGCTCTTCCATGTGCATCTGGTTCAACAGGACCACAGACTCCCCGGCCCTGGCTCCCCCCT CACCTCTGCCCTTGCCTGAGAGACAATCACAGACCTTGACTCAATCTCAGTACCAGAGCATCCAGCTTGC CACACCCCACTCCCAGCTTCAAACACTCCCAGGGCCGTCACCGTCCTCTCAATCTCAGGTTAGGGTTTGC GGTGTGTATTTCCGCAGATCCCAGGAGGCAAAAGCTCTATTGCAATCGGAAATCCACCACCTAGAGTACA ACATGATGGCGAAAGACCCGGAGAGGGAGTGGGCTTTACCCTCTGTGGTCCAAAAACCTCAGGAAGAACT TTCCCTCCTTCCTTCAAAGCTCTCCCTGGCCATAAAGTCCTCCAAGCTCCAAACTCCCAGGTCCGTTCCT CCTAGAGACTTCCCCCTGGCTGACGGGTTCCAGAAGATGTTCGAGCAGCACCTTCGAAAGAGGCTCATCC TACAGCGCTGGGGCCTGCCTCAGGGGATCTATAAGTCGCAGCTGTGGGCAAATCCTGACCCTTCAGAAGC ATCTAAGAGCAGCTCTGGGCTCTCTGGCTTTAAGCACAAAGACAACAAAGCCTGGCCCAACACTGTGTCG AACCAATCTGGAAGCCCCCAAGAGAAGTCTGTTTCTGTAGAGAGAAAAACAGTAAAAGCACACGAACAGA CTCTAGAGATTATCCAAAAATATATCTGCAGTAACTCCAAGACTGCTCTAGACAACAGCCTGCCATCTGA CCATGAGAACCTACAGGGCCACTCAGGCAGTCTGTCAGATCAATCTTCAGAGACCTCACAGGTAAGCCAA TGTCGGAAAAAATTTGAAACTCCTCCGAAAGAACATTTGAAAAGCCACATCGATGGAACCAATGAGGATC AGGTCCCTGTCACTCTGTCCAGATTAAAGCATCGTCCCCTTCATTTTAAGCCATGTGTGGGCAAGGAAGA AAAAAAGGCTGAGAGACAGTCACCTTCTGATATCAAGGATGAAGATACCAAAAGCGTACACAGAATTACA GTGCCTGGCGTGCAGCAGACATCTGTTGTCTTAGACACCACCATCCTGAAGGAGTCAGAAGCCAAAAAAC CCAGCCCAGATGTGCCCAAAATGTTGGCTAAGGCTGGCCCCATGCCAGTGGGTAAGAGCCTAAGTTCTAG CAAAATAGTCCAGGGGCCTCAAGGGACAAAGATGGATGACAAACACGTATTTGTATCCAACAAGGTCAGT AACATAGTCAAAGAGCAGCTCGGTGGCCTTCAACCACGACCTACCAAGATCTCGAAAGCCAGCCAGTGCA AGAGTGCTAAAGATGGAGATGGGAATACACCAAGCACACAAAGAACCCAGTTAGCTGGAAGAGCCCCGGA AGGAATATCAGGTCCCCCGGACATTCAGGCATCTGACTTTAGTTGTCAGGTGACCAGGGAGGAGAAATCC GAATCAGAAAACCGTCAGCCCATCCAAGCTTCAGAGCCCCCAAAAGTCATGCTCCCTGTCTCAGATAAAC TCACTCACACACCTTTACCCATTCATGATCAGATGCCTTCCAGCGCTCTCACCAATGCAGTTCAGGTGCA GCCACAGGAGCCTGAGATGCCTGCTCACTCCTTAGGCAAGGGTCTGAACAAGGACAGCCCTCAATCTGCC AAGAGGTCGTGGAAAATAGAAGGGGTTGCAGGGCCTGAGACGTTACAACCCAGTGGGAAGATTCACCGTG CGCAGGATAGCCCGACCCCGGGGAATCATGGGAAAAGACCGATCCCACCGTCACCGCCCGTGAAGGCCCT GTCTCCTCCTGAGCATCACTTCAGGAAGCAGGTCAAACACTTTTTCCAGTGGCTTTCTCCTGACAGAAAA TGCAAAGGACAGGAAGCACTCCTGAAAAGGGGCACTTCCCCACCGTCACCAGCACACGACCCGGAACAAA AGGGGAGAGCTACCTTTCCTGGGAACACTGTAGCTCAGAAAGCCCTGAGAGACTTTGGGAAGGTCCCCAA GGAGCAACCGGGGCACAGGCATGGTGCGGCAGATACCATGCGCCCCCGCGTGCCCGTATCTCCGCCCACC AAGCCTGTAAAAACTAAGCCGAAGAGAGAGTATTGCGTCCCAACAGACCCAGTCCAGGGACGCCAGCTCC ACCCCCCAGCACCGGTCTCTAAAGTGCCAAGTCCCAGGTTCCACAATCAGGCCGCTGCTTTTGTTGATCA AAAGAGATGCGTGGCAGAAAGGGCCAGACAGCCCCAGAAATGTGAGGCTTTACAGCCTCGCCCATCCGCG TCCCACAGAGAGTCAGAACTGCGCCAAAATCTCCTGTGGAGTCGAGCTGGGAAAGTTCCTCAGGGGACAC CCCCCTTTGCTGTAGGGACTATGTTGGCCGACATGTCCCGGTTATGTGAACAGAAAATTCTGGCTCAGAA TTTCAGAGGAAAAGCTTTTGTCCCCCAGAAATAA
Translation (1247 aa): MKKVLSILNSSILTSAKESWLSIGSIFVDIYPKCIILSVLGLLFLFLRYLILKPFLPTQTSQGVRKQQGR AKRERRASFNEFRNFHGEARERRKLQAVVQSPCGQLYDPFYFRQALCQDPRCDVCNGATVKVRRLLSWAS LEDCSASASSMASMASTASVTEASFTLSSSLSPSPSGYQLSSFSVAPSPPPPSILSTSTFTPLEDTLLGT PQGDSLPPEPTLTSTGFPLDHLLPHPLPKSPSVAHPAAQQTEGPLRPEDILSLAGSHGDQFLHATTTCDA LPVSYQQQPGAQSSSPSQLKCLVNQEIPNHCSSEDFWRGQASPHFTVPQKVLKILERQEESQADVLTLKD REGEAEPTAEQNLGASFPLGGSRVILSELNPQQGLAQVQSSGGQLEAMPMQHFWGLPYLHSESMSCITTL SSHCSSMCIWFNRTTDSPALAPPSPLPLPERQSQTLTQSQYQSIQLATPHSQLQTLPGPSPSSQSQVRVC GVYFRRSQEAKALLQSEIHHLEYNMMAKDPEREWALPSVVQKPQEELSLLPSKLSLAIKSSKLQTPRSVP PRDFPLADGFQKMFEQHLRKRLILQRWGLPQGIYKSQLWANPDPSEASKSSSGLSGFKHKDNKAWPNTVS NQSGSPQEKSVSVERKTVKAHEQTLEIIQKYICSNSKTALDNSLPSDHENLQGHSGSLSDQSSETSQVSQ CRKKFETPPKEHLKSHIDGTNEDQVPVTLSRLKHRPLHFKPCVGKEEKKAERQSPSDIKDEDTKSVHRIT VPGVQQTSVVLDTTILKESEAKKPSPDVPKMLAKAGPMPVGKSLSSSKIVQGPQGTKMDDKHVFVSNKVS NIVKEQLGGLQPRPTKISKASQCKSAKDGDGNTPSTQRTQLAGRAPEGISGPPDIQASDFSCQVTREEKS ESENRQPIQASEPPKVMLPVSDKLTHTPLPIHDQMPSSALTNAVQVQPQEPEMPAHSLGKGLNKDSPQSA KRSWKIEGVAGPETLQPSGKIHRAQDSPTPGNHGKRPIPPSPPVKALSPPEHHFRKQVKHFFQWLSPDRK CKGQEALLKRGTSPPSPAHDPEQKGRATFPGNTVAQKALRDFGKVPKEQPGHRHGAADTMRPRVPVSPPT KPVKTKPKREYCVPTDPVQGRQLHPPAPVSKVPSPRFHNQAAAFVDQKRCVAERARQPQKCEALQPRPSA SHRESELRQNLLWSRAGKVPQGTPPFAVGTMLADMSRLCEQKILAQNFRGKAFVPQK
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