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Report for CCDS49199.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
49199.1 |
Public |
Mus musculus |
12 |
Macc1 |
23 |
108 |
98 |
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Public Note for CCDS 49199.1 |
The exon combination of this CCDS representation is inferred based on orthologous transcript alignments, e.g., human AJ313524.1, BC137090.1 or BC144470.1. Partial mouse transcript data also support this representation, e.g., mRNA accession AK028965.1, and RNA-Seq data from the ENCODE project. |
Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 49199.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000048880.6 |
ENSMUSP00000042955.6 |
Accepted |
alive |
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EBI |
ENSMUST00000222058.1 |
ENSMUSP00000152123.1 |
Accepted |
alive |
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EBI |
ENSMUST00000222784.1 |
ENSMUSP00000152677.1 |
Accepted |
alive |
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EBI |
ENSMUST00000221917.1 |
ENSMUSP00000152808.1 |
Accepted |
alive |
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EBI |
ENSMUST00000221866.1 |
ENSMUSP00000152883.1 |
Accepted |
alive |
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NCBI |
NM_001163136.1 |
NP_001156608.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 49199.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2556 nt): ATGCTAATCAGTGAAAGAGCCTATTGTTGGCCACGAGAAATTGGTCGAAGTAGATCTGAAGGAAATTTGA TTGACATGGAAGCCTCGAAACGCTCAAAAAATCAAAATATTACAGCACGGCAAGGGCTAGGCTTGCCTCA CAACTGGCCAGATGCTCCTACCCTCCATCGTGATAGTGATGCCAAAGCTACAAATCCATTCTGGAAGGAA CTGTCTGCCTCAAACCCATTTCTGGAGGACATCACGCAGCTAAGAAACAACAAAAAGAGAGATAATATGT CTATCTTGAAGGAAGATCCTTTTCTTTTTTTAAGACAAATAGAAACAGAAAATTCTTTTGACTCCTCTGG TGATGAACTTGACATGGATCAGGGGTTTAAGTCATCTTCCTCTCGGAAGTCAGGAAGGTCTAAGAGTGTT TCTGAACTCCTGGATGTTTTAGGTGATAGGACACACACTCATCAAAGTATACATAGCTCTGATCAGATCC TAATACAAGACTTAGAATGGCTACAAAATGACCGAGAAGCATATAAAATGGCTTGGCTTAGTCAACGTCA GTTGGCTCGCTCTTGCCTAGATCTGAATACAATTAATCAGAGTCCTGGGTGGGCTCAAACACAAATTGCA GAGACCATTGCAGTTTGTAAATTAAATCACCAAGGAGGGTCAGTCCAATTACCCGACTCAGACATCACTA TTCATATACCCCAAGGACATATAGCTGTGGGAGAATTCCAGGAGGTATCTCTGAGAGCATTTCTGGATCC TCCACCAAAGCTGAACCATGATCTCTCTTGTACTGTAAGCCCTCTCTTGGAAATCAGGTTAAGCAATCTG AATACCATGGAAGCTATTTTGTTGGAGATGAAAACTGGAGCAGAAGTAAAAACAGATCCTCTGAGCCAAG TCATGACTAAAATGGTGTGTTTGTACAGCCTGGACAGAGAAGGCCCTTTCCAAGCATTAAACACCTGCTA TATCTACAAAGATACCATCCAAGCTAAGCTTCTTGACCTGAGCCATGTAATGTATATAGTCATAGCTGTA CAAGCTACGATCATTCATCCACCAGCTGCTACTATTTGGGATTATATCCACAAAACCACCTCTATTGGAA TTTATGGACCTAAATATCTCCATCCAAGCTTTACTGCTGTTTTCACTGTTTGTGGACACAACTATGTGCC AGGAAAGTTTACAGTCTCTGACATTAGGAAGGGTGGAAAAAACACATCTCCAGTCGTATTTCACCTCTGG GGGAAGCATTCATTTTCACTTGACAAGCCAAAAGATTTAATTATTTCAGCTTTTTCGTGTGATCCTGATT TTGAAGTAAAGGAAGAGGGAGAAAGAAAAGTAATTGCACAAAGGCAATTGGAAGCAGGTGTGGTAGTTCA TCAACAAGTTTTCTTTTCTTCAATTGATCACAGAGAGATGCACTTGTTTGTTTTCCGGGTTCAGGTAAAG ACCCCCAATGAAAAACCAGTGACACAGTTCTTTGTCACTTCACCTGATCCATCCCCAAATCTAAAAAGGT TCTCATATCTGCCAGGATTTTTCCAGAAGAGAGAAGACAAGAGAGTGCCTTTATTGTCGACAGGACTTGT TAAGTATCCCACTTTCCAAGATAAAAAATTGAACTTTACCAATTATGGGGTTGCACTGAAGACAGTACTG AGGCAAAATAAGATTGACTATTTGCTTGAATATTTAAAAGGGGACACAATTGCCCTTCTTGGAGAAGGTA CAGTAAGAGCCATAGGACAGTCCAAAGTGAAAGAATGGTACGTAGGAGTCCTCCGAGGTAAGATCGGACT CGTGCATTGTAAAAATGTCAAAGTGATTTCTAAAGAACAAGTGATGTCAATGTCTGATGGCATTTTGACA ACCAAGAATCTTCTGGAACAAATTGCCTTGCCATTTAAAAGTCTGACTTATATATACTCTGTTGTATTGA CCTTGGTGTCAGAAAAAGTTCACGACTGGAAAGTTTTAGCTAATGTCCTGGGTTACTCACATCTGGCACA GGAAGATTTTAATAGAATTCAAGCAGACAAGGAACCAGAAAGGGTTTCTTACGTTGTCAAGAAGTTAAAG GAAGATTGCCATGAAGATAGAAATACCAGGAAGTTCCTTTATGAACTGATTGTGGCTCTGCTAAAAATGG ATTGCCAAGAGTTAGTGGCACATCTTATCCAAGAGGCTGTTATTCTGACTTCAGCTGTGAAACTTGGAAG AAGCTGGAGGGAACTTGCTGAGAAATCTGCAGGACTCACTAAGCATCAGATGCAGGCATATGAAATTCCT CACCGAGGAAAATCTGGAGATGTTTCAGCAGAGATGATGTGGAAACCTGCCTATGATTTTCTCTATGCAT GGAGTTTTCACTATGGAAATAGCTACAGAGATGTGTTACAAGATCTTCAATCAGCTTTGGACAGAATGAA AAACCCTGTCACTAAACGGTGGAGAGATTTAACTGGAACTTTAATACTTATAAATTCTTTAGAGATTCTG AGAGTGACTGCTTTCTCTACTTCTCAGGAAATATAG
Translation (851 aa): MLISERAYCWPREIGRSRSEGNLIDMEASKRSKNQNITARQGLGLPHNWPDAPTLHRDSDAKATNPFWKE LSASNPFLEDITQLRNNKKRDNMSILKEDPFLFLRQIETENSFDSSGDELDMDQGFKSSSSRKSGRSKSV SELLDVLGDRTHTHQSIHSSDQILIQDLEWLQNDREAYKMAWLSQRQLARSCLDLNTINQSPGWAQTQIA ETIAVCKLNHQGGSVQLPDSDITIHIPQGHIAVGEFQEVSLRAFLDPPPKLNHDLSCTVSPLLEIRLSNL NTMEAILLEMKTGAEVKTDPLSQVMTKMVCLYSLDREGPFQALNTCYIYKDTIQAKLLDLSHVMYIVIAV QATIIHPPAATIWDYIHKTTSIGIYGPKYLHPSFTAVFTVCGHNYVPGKFTVSDIRKGGKNTSPVVFHLW GKHSFSLDKPKDLIISAFSCDPDFEVKEEGERKVIAQRQLEAGVVVHQQVFFSSIDHREMHLFVFRVQVK TPNEKPVTQFFVTSPDPSPNLKRFSYLPGFFQKREDKRVPLLSTGLVKYPTFQDKKLNFTNYGVALKTVL RQNKIDYLLEYLKGDTIALLGEGTVRAIGQSKVKEWYVGVLRGKIGLVHCKNVKVISKEQVMSMSDGILT TKNLLEQIALPFKSLTYIYSVVLTLVSEKVHDWKVLANVLGYSHLAQEDFNRIQADKEPERVSYVVKKLK EDCHEDRNTRKFLYELIVALLKMDCQELVAHLIQEAVILTSAVKLGRSWRELAEKSAGLTKHQMQAYEIP HRGKSGDVSAEMMWKPAYDFLYAWSFHYGNSYRDVLQDLQSALDRMKNPVTKRWRDLTGTLILINSLEIL RVTAFSTSQEI
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