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Report for CCDS4903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4903.1 Public Homo sapiens 6 GTPBP2 24 110 108 CCDS HistoryNCBI Gene:54676Re-query CCDS DB by CCDS ID:4903.1Re-query CCDS DB by GeneID:54676See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4903.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307126.10 ENSP00000303997.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307126.10Link to Ensembl Protein Viewer:ENSP00000303997.5Re-query CCDS DB by Nucleotide ID:ENST00000307126Re-query CCDS DB by Protein ID:ENSP00000303997
Original member Current member NCBI NM_019096.5 NP_061969.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019096.5Link to Protein Sequence:NP_061969.3Re-query CCDS DB by Nucleotide ID:NM_019096Re-query CCDS DB by Protein ID:NP_061969Link to BLAST:NP_061969.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061969.3 602 Q9BX10-1 602 100% 0 0

Chromosomal Locations for CCDS 4903.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43621614 43621790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43622003 43622167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43622633 43622804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43623737 43623795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43623933 43624068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43624510 43624729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43624888 43625062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43625363 43625560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43625756 43625864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43626226 43626410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43626922 43626948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43628977 43629162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1809 nt):
ATGGACTCGCGGGTATCGGAGCTGTTCGGCGGCTGCTGCCGGCCCGGAGGGGGCCCGGCCGTGGGCGGAA
CCCTCAAGGCTAGGGGGGCCGGCAGCAGCAGCGGCTGCGGGGGGCCAAAGGGAAAGAAGAAGAACGGAAG
GAACAGAGGGGGCAAAGCCAACAACCCCCCGTATTTGCCCCCCGAGGCTGAAGATGGAAACATTGAATAT
AAATTGAAGCTGGTGAATCCATCCCAGTACCGCTTTGAGCACCTGGTGACACAAATGAAGTGGCGGCTCC
AGGAGGGACGTGGTGAGGCCGTCTACCAGATTGGGGTAGAGGACAATGGGCTGCTGGTGGGGCTGGCTGA
GGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGGGGCAGACATAACCGTT
CTTCGAGAGCGAGAAGTGGATTATGATAGCGACATGCCCCGGAAGATCACCGAGGTGCTAGTACGAAAGG
TCCCTGACAACCAACAGTTCCTAGACCTCCGTGTGGCCGTCCTGGGGAATGTGGACTCTGGGAAGTCAAC
TCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGACAATGGGCGGGGCCGGGCTCGGCTCAACCTTTTCCGC
CACCTGCATGAGATTCAGTCTGGCCGAACCTCCAGCATCAGCTTCGAGATCCTGGGCTTTAACAGCAAGG
GAGAGGTGGTGAATTACAGCGACTCACGGACAGCAGAAGAGATCTGTGAGAGCAGCTCCAAGATGATCAC
CTTCATCGACCTGGCAGGCCACCATAAGTACCTACACACCACCATCTTTGGCCTCACATCATACTGCCCC
GACTGCGCCCTGCTCCTCGTCAGTGCCAACACTGGGATTGCTGGCACCACAAGGGAACATCTGGGGCTGG
CCCTGGCCCTGAAAGTGCCCTTCTTCATCGTGGTCAGCAAGATCGACCTATGTGCCAAGACCACAGTGGA
GAGGACAGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGTCCCCATGCTGGTCACC
TCTGAGGATGATGCCGTCACTGCTGCCCAGCAGTTTGCTCAGTCACCCAATGTCACCCCCATCTTCACAT
TGTCCAGTGTGTCTGGAGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATATTCTGCCGCCACTCACCAA
CAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCAGGTGGATGAAATCTACACAGTACCA
GAGGTGGGGACTGTTGTTGGAGGAACACTTTCCAGTGGGATTTGCCGTGAGGGGGACCAGCTGGTGGTGG
GCCCCACGGATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCAACCGCTCTGCCTGTCG
TGTGCTGCGAGCTGGTCAGGCTGCTACACTGGCGCTTGGGGACTTTGACCGTGCACTGCTTCGCAAGGGC
ATGGTGATGGTGAGCCCGGAGATGAATCCTACCATCTGCTCGGTGTTTGAGGCAGAGATAGTCTTACTGT
TCCATGCCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACGTACGTCAGACGGCAGT
GGTGGAAAAGATCCATGCCAAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGTACGTTTCCGCTTCCTG
AAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTCACCAAGGGCATCGGCC
ATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCTTCTGA

Translation (602 aa):
MDSRVSELFGGCCRPGGGPAVGGTLKARGAGSSSGCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEY
KLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITV
LREREVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFR
HLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCP
DCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVT
SEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVP
EVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKG
MVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFL
KHPEYLKVGAKLLFREGVTKGIGHVTDVQAITAGEAQANMGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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