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Report for CCDS4882.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4882.1 Public Homo sapiens 6 KLC4 24 110 108 CCDS HistoryNCBI Gene:89953Re-query CCDS DB by CCDS ID:4882.1Re-query CCDS DB by GeneID:89953See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4882.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259708.7 ENSP00000259708.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000259708.7Link to Ensembl Protein Viewer:ENSP00000259708.3Re-query CCDS DB by Nucleotide ID:ENST00000259708Re-query CCDS DB by Protein ID:ENSP00000259708
Original member Current member NCBI NM_201523.3 NP_958931.1 Accepted alive Link to Nucleotide Sequence:NM_201523.3Link to Protein Sequence:NP_958931.1Re-query CCDS DB by Nucleotide ID:NM_201523Re-query CCDS DB by Protein ID:NP_958931Link to BLAST:NP_958931.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958931.1 637 Q9NSK0-3 637 100% 0 0

Chromosomal Locations for CCDS 4882.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43060210 43060238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43061311 43061593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43062917 43063147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43065620 43065701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43066306 43066525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43066996 43067083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43070354 43070455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43070692 43070865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43071275 43071374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43071567 43071619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43071852 43071922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43072147 43072255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43072824 43072964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43073223 43073338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43073902 43073965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43074622 43074672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1914 nt):
ATGGAAGTGACTGGGTTTGGAGTGACCAGACCGGGCAAGGTCCCCCAGGCCAGGATGTCAGGCCTGGTGT
TGGGGCAGCGGGATGAGCCTGCAGGCCACCGGCTCAGCCAAGAGGAGATCCTGGGGAGCACACGGCTGGT
CAGCCAAGGGCTAGAGGCCCTACGCAGTGAACACCAGGCCGTGCTGCAAAGCCTGTCCCAGACCATTGAG
TGTCTGCAGCAGGGAGGCCATGAGGAAGGGCTGGTGCATGAGAAGGCCCGGCAGCTTCGCCGTTCTATGG
AAAACATTGAGCTCGGGCTGAGTGAGGCCCAGGTGATGCTGGCTCTAGCCAGCCACCTGAGCACAGTGGA
GTCGGAGAAACAGAAGCTGCGGGCTCAGGTGCGGCGGCTATGCCAGGAGAACCAGTGGCTGCGGGATGAG
CTGGCTGGCACCCAGCAGCGGCTACAGCGCAGTGAACAGGCTGTGGCTCAGCTGGAGGAGGAAAAGAAGC
ACCTGGAGTTCCTGGGGCAGCTGCGGCAGTATGATGAGGATGGACATACCTCGGAGGAGAAAGAAGGCGA
TGCCACCAAGGATTCCCTGGATGACCTCTTTCCTAATGAGGAGGAAGAGGACCCCAGCAATGGCTTGTCC
CGTGGTCAAGGTGCTACAGCAGCTCAGCAGGGTGGATATGAGATCCCAGCAAGGTTGCGGACGTTGCACA
ACCTGGTGATCCAGTACGCAGCCCAAGGTCGCTATGAGGTGGCCGTGCCACTCTGTAAGCAGGCACTAGA
GGACCTGGAGCGCACATCAGGCCGTGGCCACCCTGATGTCGCCACCATGCTCAACATCCTTGCTTTGGTG
TATCGTGACCAGAATAAGTATAAGGAAGCTGCCCACCTGCTGAATGATGCCCTTAGCATCCGGGAGAGCA
CCTTGGGACCTGACCATCCTGCTGTGGCTGCCACACTCAACAATTTGGCTGTGCTCTATGGCAAAAGGGG
CAAGTACAAGGAGGCAGAGCCTCTGTGCCAGCGGGCACTGGAGATTCGAGAAAAGGTCCTGGGCACGAAT
CATCCAGATGTGGCAAAACAGCTGAACAACCTGGCCCTCTTGTGCCAAAACCAGGGCAAGTATGAGGCCG
TGGAACGCTACTACCAGCGAGCACTGGCCATCTACGAGGGGCAGCTGGGGCCGGACAACCCTAATGTAGC
CCGGACCAAGAACAACCTGGCTTCCTGTTACCTGAAACAGGGCAAATATGCTGAGGCTGAGACACTATAC
AAAGAGATCCTGACCCGTGCCCATGTACAGGAGTTTGGGTCTGTGGATGATGACCACAAGCCCATCTGGA
TGCATGCAGAGGAGCGGGAGGAAATGAGCAAAAGCCGGCACCATGAGGGTGGGACACCCTATGCTGAGTA
TGGAGGCTGGTACAAGGCCTGCAAAGTGAGCAGCCCCACAGTGAACACTACTCTGAGAAACCTGGGAGCT
CTGTATAGGCGCCAGGGAAAGCTGGAGGCTGCTGAGACCCTGGAGGAATGTGCCCTGCGGTCCCGGAGAC
AGGGCACTGACCCTATCAGCCAGACGAAGGTGGCAGAGCTGCTTGGGGAGAGTGATGGTAGAAGGACCTC
CCAGGAGGGCCCTGGAGACAGTGTGAAATTCGAGGGAGGTGAAGATGCTTCTGTGGCTGTGGAGTGGTCC
GGGGATGGCAGTGGGACCCTGCAGAGGAGTGGCTCTCTTGGCAAGATCCGGGATGTGCTCCGCAGAAGCA
GTGAACTCTTGGTGAGGAAGCTCCAGGGGACTGAGCCTCGGCCCTCCAGCAGCAACATGAAGCGAGCAGC
CTCCTTGAACTATCTGAACCAACCTAGTGCAGCACCCCTCCAGGTCTCCCGGGGCCTCAGTGCCAGCACC
ATGGACCTCTCTTCAAGCAGCTGA

Translation (637 aa):
MEVTGFGVTRPGKVPQARMSGLVLGQRDEPAGHRLSQEEILGSTRLVSQGLEALRSEHQAVLQSLSQTIE
CLQQGGHEEGLVHEKARQLRRSMENIELGLSEAQVMLALASHLSTVESEKQKLRAQVRRLCQENQWLRDE
LAGTQQRLQRSEQAVAQLEEEKKHLEFLGQLRQYDEDGHTSEEKEGDATKDSLDDLFPNEEEEDPSNGLS
RGQGATAAQQGGYEIPARLRTLHNLVIQYAAQGRYEVAVPLCKQALEDLERTSGRGHPDVATMLNILALV
YRDQNKYKEAAHLLNDALSIRESTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCQRALEIREKVLGTN
HPDVAKQLNNLALLCQNQGKYEAVERYYQRALAIYEGQLGPDNPNVARTKNNLASCYLKQGKYAEAETLY
KEILTRAHVQEFGSVDDDHKPIWMHAEEREEMSKSRHHEGGTPYAEYGGWYKACKVSSPTVNTTLRNLGA
LYRRQGKLEAAETLEECALRSRRQGTDPISQTKVAELLGESDGRRTSQEGPGDSVKFEGGEDASVAVEWS
GDGSGTLQRSGSLGKIRDVLRRSSELLVRKLQGTEPRPSSSNMKRAASLNYLNQPSAAPLQVSRGLSAST
MDLSSSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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