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Report for CCDS48723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48723.1 Public Mus musculus 10 Naca 23 108 98 CCDS HistoryNCBI Gene:17938Re-query CCDS DB by CCDS ID:48723.1Re-query CCDS DB by GeneID:17938See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48723.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092048.12 ENSMUSP00000089680.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092048.12Link to Ensembl Protein Viewer:ENSMUSP00000089680.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000092048Re-query CCDS DB by Protein ID:ENSMUSP00000089680
Original member NCBI NM_001113199.1 NP_001106670.1 Updated not alive Link to Nucleotide Sequence:NM_001113199.1Link to Protein Sequence:NP_001106670.1Re-query CCDS DB by Nucleotide ID:NM_001113199Re-query CCDS DB by Protein ID:NP_001106670
Current member NCBI NM_001113199.2 NP_001106670.1 Accepted alive Link to Nucleotide Sequence:NM_001113199.2Link to Protein Sequence:NP_001106670.1Re-query CCDS DB by Nucleotide ID:NM_001113199Re-query CCDS DB by Protein ID:NP_001106670Link to BLAST:NP_001106670.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106670.1 2187 P70670-1 2187 100% 0 0

Chromosomal Locations for CCDS 48723.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128036491 128036560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128039171 128045086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128046168 128046253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128046729 128046806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128047658 128047804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128047999 128048127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128048245 128048367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128048493 128048507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6564 nt):
ATGCCCGGTGAAGCCACAGAAACCGTCCCTGCTACAGAGCAGGAGTTGCCACAGCCTCAGGCTGAGACAG
CTGTGCTTCCTATGTCTTCAGCCTTGAAAGTTGCTGCTGTAGGGCAGCCTGGACCTACCCCTCCTTCTTC
CCTGGGCCCCCAGCAAAGCCCTATAGTAACTGCTCATCAGCCTTCTCCACTCCCTTCTAGTGTTTCCTCG
ACCCCCTTTGAAGTTCCTTTTGCCCAGCCCATAACAGCTGAAACTGCTCTGCCCTCAGGAACTGCCCCTC
CCACCCCAACTTTCCTGCCACACCTGATAGGGCCTCCCATTTCCCCAGCTGCGCTAGCCTTGGCCTCTCC
CATGATAGGTCTAGCTCAGAAAGGTGCCAGGTCCTCCTCGGCTCCCTTGTCTCTGGTCGCATTAGCTCCT
CATTCGGTTCAGAAGAGCTCTGTATGTCCCCCTCACCCTCTCACCTCACCTCCATCAGCTGCTGGAGCAG
AGTTGGGGGCATTGACAGCTTCCATCCCTCCCTTAGAACCAAAGACTTCTACCAGTCAAGTTCCCTCTCA
GGGAACCCTGAATCTAAAAGGCACTGCCCCGTGTCCTCCAGATGTAGTCAGGGCTTTTCCTTCCCACCTT
GAAAACCCCCTGGCCTCTGTTCAGCCTGGTTTAATGTCCTGTCCTCAAACACTATCCAACACTTCCCCAG
TGAAAGGTGTCCCCATTTCCTCAGCTCTGACACAAAGTCGGCTAAGCCTTAACCTAAAGGGACCTGTTAG
TCCACCTGCTCGTAACACTGCAGCTCCCAGCATCCCCCTAGCACCCTCTACTTCTCTGGGCTGTCATCTT
CCACTTCTGCATCACAGTTCTGTGGATTCTCCCATCCAGCCTCCAGGTCAGTCAGGGCTTGCAGTGAGTA
ATCCCACTTCTGTAGGTCACTCTGGTATTGCAGCCTCTTGCCCACCTGAGAGATGTGTAGTTCCTGCCCT
TCCCTCCAGGCTGCTGGCTGTTGATTCTGGGGCAGCTCCATCTGACGACAAAGGCTCCTCTGCTGTTACT
AATGAGCTCTGCAGCCCTCCTGGCTCTTCAAATGTAGCTGGTACTTCCTTGTCTCCTAAAGCCTCTCTCG
TTCCCAAAGGTTCTAATGTTGCTCTACAGCCTTTGGTGACTCAAGTTCCCGCTTCTCAAAAAACTGGTTT
AAAAGAAATTCCTGTCTCCTGTATTGGAGCCACCCACCATGCCCTGGATAACCCTTCTGCCATTTCTGTA
GCACCTGCCACTCATGTGCCTCCTCCAACTTCATCAGGTCTTGTGAGTAGTAAAGACCCAGCTTCCCCTG
TCACGTCACTCGTCGTACCTGCTGCTCACAAGCAGTTTCCTGCTCCTCCAGCATCAGCTACTCTAGGGGT
GCCAGTGTCTCCTCTGCCAGCCACTGAAGGCCTTAAAAATCTTCCTATTTCGGCATTAGTAAATGTAGGC
GCCCCTGTTTCTCCAGCCCAGGCAGGGCTCCCTACCAGAAAAGACACTACTCTGCAGCCCTTGGCCCCCA
TAGCACTTAAAGAGTCTCCCTCTTCTCAGAGTGCATCATCTCTGGAGGTACTTTCAGAAGACACTGTAAC
AAAGAAGACTACAGGAGGACCTGCCCCTGTAGTGCGGCCAGCCATTGCTGGGGTTGCTACTACTACTTCC
CTGCGTGCTGACTCTCCACCTGCTGTCATCAGGGCAGATTCTTGTGTCAGCCCAAACACTGTCAGTCAGC
CTCTCAAACGTTCTGTTACTGACCCAGCAATGGCTCCTAGAACTGCCAAAAATACTGCTCCTTCTACCAC
TTCACCTTTGGTTCCTTTAGCCTCTGAAGGCTGTCCTGTGGCTTCATCTATGGCTTTGTCCCCCCAGAAT
GCTTCTGTTTCTGAGACTGCTTTGGCATTGTCCCCTGAAATTCCCAAGTCTGTGCCCTTTCCTGATCCTC
CCTTAGCTGAGATTTCTTTTTCCAATGCAAGGAAAGTTGATGCTGTCTCTCATATGGAGTCTTCAGGCTC
CTCTCGTCAGGGGCACCCAGATGCTTCTGTGACTGCCAAAGGGACTGTGGTTTGTCTAGCTGACTCATCT
TTAGACACTAGTGTGTCTGCATCCAAGGGCTCTGCTCTCTCAGGTGCTTCGTCTCCTCTCTACCCACTTG
AGGTTTCTTTCCTTCCAGAGGCAGGTCTGGCTGTTCAAGGCCCTAAAGGCTCACTTAATAAGCTTTCTCC
CACTCCTCCATCCTCCAAAGGGGCCCCTGTTCCTTCAACTGGGGCTCCTCCCTCCCCTAAAGGAGCCCCT
ATTGTTCCAACAGAAAGTTCTATATCCTCCAAACAGGTCCCAGCAGAAATTCTTCCTTCCCCCCAAAAGA
CCCCAGAAGTTACAGCTTCCAGACTGATCTCAGCAGTCCAGTCTCCTAAAGTAGACCCTATTATGTCAGA
CGTGACCCCTACCTCTCCCAAAAAGACTTCAGCAACTGCAGTCCCCAAAGATACTTCAGCAACCCTGTCT
CTCAAAAGTGTCCCGGCTGTGACTTCCCTGTCTCCCCCAAAGGCCCCTGTAGCCCCATCTAATGAAGCCA
CCATTGTTCCTACTGAGATTCCTACCTCCCTCAAAAATGCCCTAGCAGCTGCAACTCCCAAAGAGACTTT
AGCAACCTCAATTCCCAAAGTGACTTCTCCTTCCCCACAAAAGACTCCAAAATCCGTATCCCTTAAGGGT
GCCCCGGCTATGACCTCCAAAAAGGCGACAGAAATTGCAGCCTCCAAAGACGTCTCACCATCCCAGTTTC
CCAAAGAGGTTCCTCTTCTACCACATGTGCCTCCTACTTCCCCACCAAAGTCCCCAGTAAGTGATACACT
CAGTGGGGCTCTAACAAGCCCACCCCCCAAAGGTCCCCCTGCCACCCTAGCTGAGACTCCTACCTATCCT
AAAAAGTCCCCTAAACCTGCAGCATCCAAAAAAACTCCAGCGACTCCATCTCCTGAAGGGGTCACAGCTG
TTCCACTGGAGATTCCTCCTTGCTCCAAAAAGGCCCCCAAAACTGCAGCTCCCAAAGAAAGTTCAGCAAC
CTCATCTTCTAAAAGGGCCCCTAAAACTGCAGTTTCCAAAGAAATTCCTTCTAAAGGGGTCACAGCTGTG
CCATTGGAGATTTCTCTGCCTCTAAAAGAAACCTCCAAAAGTGCAACTCCTGGAGAAAAGTCAGCCTCAT
CCCCAAAAAGGTCCCCCAAAACTGCAGGCCCCAAAGAAACTCCACCTGGAGGGGTTACAGCTGTGCCCCC
GGAGATTTCTCTACCTCCAAAAGAGACACCCCAGAATGCAACCCCTAATGAAAGTTTAGCAGCCTCATCC
CAAAAAAGGTCCCCCAAAACTTCAGTCCCCAAAGAAACTCCACCTGGAGGGGTCACAGCTATGCCACTGG
AAATTCCTTCTGCCCCCCAAAAGGCCCCCAAAACTGCAGTCCCTAAACAGATTCCTACTCCCGAAGATGC
TGTTACTATCCTAGCTGGAAGTCCTCTCTCTCCCAAAAAGGCATCCAAAACCGCAGCCCCCAAAGAAGCT
CCGGCAACCCCATCTGTGGGGGTCATAGCTGTATCAGGAGAGATTTCTCCCTCCCCCAAAAAGACCTCAA
AAACTGCAGCCCCCAAAGAGAATTCAGCAACCTTACCCCCAAAAAGGTCCCCCAAAACTGCAGCCCCCAA
AGAGACTCCAGCCACATCTTCTGAAGGGGTTACAGCTGTGCCATCTGAGATTTCTCCTTCACCCCCAACT
CCAGCCTCCAAAGGGGTTCCTGTGACCCTAACTCCCAAAGGTGCCCCTAATGCCCTAGCTGAGAGTCCTG
CCTCCCCTAAAAAGGTCCCTAAAACTGCAGCCCCTGAAGAAACCTCAACAACCCCATCCCCCCAAAAAAT
TCCCAAAGTGGCAGGTCCCAAAGAGGCTTCAGCAACCCCACCTTCAAAAAAGACCCCCAAAACTGCAGTC
CCCAAAGAAACTTCAGCACCTTCTGAGGGGGTCACAGCTGTACCACTGGAAATTCCTCCCTCCCCCAGAA
AGGCCCCTAAAACTGCAGCTCCCAAAGAAACTCCAGCCCCGTCTCCTGAAGGGGCCACCACTGCACCAGT
GCAGATTCCTCCCTCCCCCAGGAAGGGCTCTAAGAAAGCAGGCTCCAAAGAAACACCTACAACCCCATCT
CCTGAAGGGGTAACAGCTGCACCTCTAGAAATTCCCATATCTTCCAAAAAGACTTCCAAAATGGCAAGTC
CTAAAGAAACGCTAGTAACCCCATCTTCCAAAAAGCTCTCCCAAACTGTAGGTCCCAAAGAAACTTCACT
TGAAGGGGCCACAGCTGTGCCACTGGAGATTCCTCCTTCCCACAAAAAGGCCCCCAAAACTGTAGATCCT
AAACAGGTTCCTCTAACCCCATCTCCTAAAGATGCCCCTACTACTCTAGCTGAAAGTCCTTCCTCCCCCA
AAAAGGCACCCAAAACTGCAGCCCCACCCTCTGAAAGGGTCACCACTGTGCCACCAGAGAAGCCTGCCAC
CCCACAGAAGGCCTCAGCAACTACAGCCTCCAAAGTGCCTGTCCCTGCCGAGACACAGGAAGTTGCTGTC
TCCTCAAGAGAGACTCCAGTAACCCCAGCTGTGCCCCCAGTCAAGAATCCTTCCTCCCATAAGAAGACCT
CAAAGACTATAGAGCTCAAAGAAGCCCCAGCAACCCTCCCTCCCTCCCCAACAAAGAGCCCCAAAATTCC
ATCATCCAAAAAGGCACCAAGGACTTCAGCCCCTAAAGAGTTTCCAGCAAGCCCTTCTATTAAACCTGTC
ACCACCTCACTGGCACAGACAGCTCCTCCCAGTCTGCAAAAGGCACCATCGACTACAATCCCCAAGGAGA
ATTTAGCTGCCCCGGCTGTTCTGCCTGTCTCCAGCAAGAGCCCAGCAGCTCCAGCTGCTGCAAGTGCTTC
CCTTTCCCCAGCTACTGCAGCTCCTCAAACAGCTCCAAAAGAGGCCACAACAATCCCATCTTGTAAAAAG
GCTGCAGCTACTGAGACCCCCATTGAGACTTCAACAGCTCCATCTCTCGAGGGGGCCCCCAAGGAGACCT
CAGAAACTTCAGTGTCCAAAGTTCTCATGTCTTCCCCTCCCAAAAAGGCTTCATCCTCCAAAAGAGCCTC
CACTCTCCCAGCTACAACTCTTCCCTCTCTTAAAGAGGCCTCTGTTCTCTCACCCACTGCCACTTCTTCC
GGAAAAGACTCTCATATTTCCCCAGTGTCCGATGCTTGTAGCACAGGAACTACTACCCCTCAGGCATCTG
AAAAGCTCCCATCAAAGAAAGGTCCTACAGCTTTCACGGAAATGCTTGCTGCACCTGCTCCAGAAAGTGC
TTTGGCCATCACTGCTCCCATTCAGAAAAGCCCAGGGGCCAACAGCAATTCTGCTTCCTCTCCTAAGTGC
CCAGACCCCTCCTCTAAGAAAGACACAAAGGGCCTCCCTTCTGCAGTAGCTCTAGCCCCTCAGACAGTTC
CTGTTGAGAAAGACACTTCAAAAGCTATAGAAACTCTGCTTGTTAGCCCTGCAAAAGGCAGTGATTGTCT
TCATTCCCCAAAGGGTCCTGTGGGGTCTCAGGTAGCTACTCCACTAGCAGCGTTTACCTCTGACAAAGTC
CCTCCGGAAGCTGTGTCTGCATCTGTGGCTCCAAAGCCTGCCCCAGCAGCTTCCCTGACTCTTGCTCCCT
CCCCAGTTGCCCCTCTGCCTCCTAAACAGCCACTTCTTGAGTCTGCACCTGGGTCGGTGCTGGAGTCCCC
CTCTAAGCTCCCAGTCCCTGCTGAGGAGGATGAGCTGCCGCCTCTGATTCCCCCGGAAGCAGTCTCTGGG
GGAGAGCCTTTCCAGCCGATCCTCGTCAACATGCCCGCCCCTAAACCTGCTGGGACCCCTGCCCCAGCCC
CCTCTGCCAAGCAGCCTGTTCTGAAGAACAACAAGGGATCGGGAACAGAGTCTGACAGTGATGAGTCAGT
ACCAGAGCTCGAGGAACAAGACTCCACACAGACGGCCACGCAGCAAGCCCAGCTGGCAGCCGCAGCAGAG
ATCGATGAAGAACCTGTTAGTAAAGCCAAGCAGAGTCGAAGTGAGAAGAAGGCAAGGAAGGCTATGTCCA
AACTGGGTCTTCGACAGGTTACAGGGGTTACGAGAGTCACTATCCGAAAATCTAAAAATATCCTCTTTGT
CATCACAAAACCCGATGTCTACAAGAGCCCAGCTTCAGACACCTACATAGTGTTTGGGGAAGCCAAGATT
GAAGATTTGTCTCAGCAAGCACAGTTAGCAGCTGCTGAGAAATTCAAAGTTCAAGGTGAAGCTGTTTCAA
ACATTCAGGAAAACACTCAGACTCCAACCGTCCAAGAGGAGAGTGAAGAAGAGGAGGTTGATGAGACGGG
TGTGGAAGTTAAGGACATAGAACTGGTCATGTCGCAAGCAAACGTATCAAGAGCAAAGGCTGTTCGAGCC
CTGAAAAACAACAGTAATGATATTGTAAATGCTATTATGGAATTAACAATGTAA

Translation (2187 aa):
MPGEATETVPATEQELPQPQAETAVLPMSSALKVAAVGQPGPTPPSSLGPQQSPIVTAHQPSPLPSSVSS
TPFEVPFAQPITAETALPSGTAPPTPTFLPHLIGPPISPAALALASPMIGLAQKGARSSSAPLSLVALAP
HSVQKSSVCPPHPLTSPPSAAGAELGALTASIPPLEPKTSTSQVPSQGTLNLKGTAPCPPDVVRAFPSHL
ENPLASVQPGLMSCPQTLSNTSPVKGVPISSALTQSRLSLNLKGPVSPPARNTAAPSIPLAPSTSLGCHL
PLLHHSSVDSPIQPPGQSGLAVSNPTSVGHSGIAASCPPERCVVPALPSRLLAVDSGAAPSDDKGSSAVT
NELCSPPGSSNVAGTSLSPKASLVPKGSNVALQPLVTQVPASQKTGLKEIPVSCIGATHHALDNPSAISV
APATHVPPPTSSGLVSSKDPASPVTSLVVPAAHKQFPAPPASATLGVPVSPLPATEGLKNLPISALVNVG
APVSPAQAGLPTRKDTTLQPLAPIALKESPSSQSASSLEVLSEDTVTKKTTGGPAPVVRPAIAGVATTTS
LRADSPPAVIRADSCVSPNTVSQPLKRSVTDPAMAPRTAKNTAPSTTSPLVPLASEGCPVASSMALSPQN
ASVSETALALSPEIPKSVPFPDPPLAEISFSNARKVDAVSHMESSGSSRQGHPDASVTAKGTVVCLADSS
LDTSVSASKGSALSGASSPLYPLEVSFLPEAGLAVQGPKGSLNKLSPTPPSSKGAPVPSTGAPPSPKGAP
IVPTESSISSKQVPAEILPSPQKTPEVTASRLISAVQSPKVDPIMSDVTPTSPKKTSATAVPKDTSATLS
LKSVPAVTSLSPPKAPVAPSNEATIVPTEIPTSLKNALAAATPKETLATSIPKVTSPSPQKTPKSVSLKG
APAMTSKKATEIAASKDVSPSQFPKEVPLLPHVPPTSPPKSPVSDTLSGALTSPPPKGPPATLAETPTYP
KKSPKPAASKKTPATPSPEGVTAVPLEIPPCSKKAPKTAAPKESSATSSSKRAPKTAVSKEIPSKGVTAV
PLEISLPLKETSKSATPGEKSASSPKRSPKTAGPKETPPGGVTAVPPEISLPPKETPQNATPNESLAASS
QKRSPKTSVPKETPPGGVTAMPLEIPSAPQKAPKTAVPKQIPTPEDAVTILAGSPLSPKKASKTAAPKEA
PATPSVGVIAVSGEISPSPKKTSKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSPPT
PASKGVPVTLTPKGAPNALAESPASPKKVPKTAAPEETSTTPSPQKIPKVAGPKEASATPPSKKTPKTAV
PKETSAPSEGVTAVPLEIPPSPRKAPKTAAPKETPAPSPEGATTAPVQIPPSPRKGSKKAGSKETPTTPS
PEGVTAAPLEIPISSKKTSKMASPKETLVTPSSKKLSQTVGPKETSLEGATAVPLEIPPSHKKAPKTVDP
KQVPLTPSPKDAPTTLAESPSSPKKAPKTAAPPSERVTTVPPEKPATPQKASATTASKVPVPAETQEVAV
SSRETPVTPAVPPVKNPSSHKKTSKTIELKEAPATLPPSPTKSPKIPSSKKAPRTSAPKEFPASPSIKPV
TTSLAQTAPPSLQKAPSTTIPKENLAAPAVLPVSSKSPAAPAAASASLSPATAAPQTAPKEATTIPSCKK
AAATETPIETSTAPSLEGAPKETSETSVSKVLMSSPPKKASSSKRASTLPATTLPSLKEASVLSPTATSS
GKDSHISPVSDACSTGTTTPQASEKLPSKKGPTAFTEMLAAPAPESALAITAPIQKSPGANSNSASSPKC
PDPSSKKDTKGLPSAVALAPQTVPVEKDTSKAIETLLVSPAKGSDCLHSPKGPVGSQVATPLAAFTSDKV
PPEAVSASVAPKPAPAASLTLAPSPVAPLPPKQPLLESAPGSVLESPSKLPVPAEEDELPPLIPPEAVSG
GEPFQPILVNMPAPKPAGTPAPAPSAKQPVLKNNKGSGTESDSDESVPELEEQDSTQTATQQAQLAAAAE
IDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKI
EDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRA
LKNNSNDIVNAIMELTM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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