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Report for CCDS48708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48708.1 Public Mus musculus 10 Mon2 23 108 98 CCDS HistoryNCBI Gene:67074Re-query CCDS DB by CCDS ID:48708.1Re-query CCDS DB by GeneID:67074See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48708.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170935.8 ENSMUSP00000131052.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170935.8Link to Ensembl Protein Viewer:ENSMUSP00000131052.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170935Re-query CCDS DB by Protein ID:ENSMUSP00000131052
Original member Current member NCBI NM_001163025.1 NP_001156497.1 Accepted alive Link to Nucleotide Sequence:NM_001163025.1Link to Protein Sequence:NP_001156497.1Re-query CCDS DB by Nucleotide ID:NM_001163025Re-query CCDS DB by Protein ID:NP_001156497Link to BLAST:NP_001156497.1

Chromosomal Locations for CCDS 48708.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 122995670 122995833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122999659 122999741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123002696 123002903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123006012 123006135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123006972 123007032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123008136 123008326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123009503 123009631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123010494 123010637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123013368 123013990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123014941 123015139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123016263 123016556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123018075 123018237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123020304 123020479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123022834 123022944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123023910 123024011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123026080 123026170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123026254 123026327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123026407 123026487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123026909 123027013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123029133 123029245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123030110 123030294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123031040 123031124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123032523 123032749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123034305 123034458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123035468 123035604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123036012 123036136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123038461 123038655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123042231 123042356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123042975 123043069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123046298 123046427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123051637 123051768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123052185 123052312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123059188 123059251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123075852 123075962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5130 nt):
ATGTCCTGCACCAACAGCCCCGAGGCTGTGAAGAAGCTGCTGGAGAATATGCAGAGCGACCTGCGGGCCT
TGTCACTAGAATGCAAGAAGAAGTTCCCACCTGTCAAGGAGGCTGCTGAATCGGGAATAATAAAAGTTAA
AACAATAGCTGCAAGAAACACGGAAATTTTGGCAGCATTGAAAGAGAACAGCTCAGAGGTCGTGCAGCCT
TTCCTAATGGGGTGTGGGACCAAGGAACCAAAGATCACACAGTTGTGTTTGGCCGCCATCCAGAGACTCA
TGTCCCATGAAGTGGTGTCTGAGACTGCTGCTGGAAACATAATTAACATGCTTTGGCAGCTAATGGAAAA
CAGCCTTGAAGAACTTAAGCTGCTTCAAACAGTTCTTGTTCTTTTAACAACCAACACGGTAGTTCATGAC
GAGGCACTTTCCAAGGCTATAGTTCTCTGTTTTCGACTCCACTTCACAAAGGACAATATTACAAATAACA
CAGCTGCTGCTACAGTCCGACAGGTCGTGACTGTCGTCTTCGAGAGGATGGTGGCTGAAGATGACCGTCA
CAGAGATATAGAACCTCCAGTGCCGATCCAAGGAAACAGTAACAGAAGGTCTGTCAGCACGCTGAGACCC
TGTGCTAAGGACGCATACATGCTCTTCCAGGACCTCTGTCAGTTGGTTAACGCTGACGCCCCTTACTGGC
TAGTGGGCATGACGGAAATGACTCGGACATTTGGCCTTGAGTTGCTAGAGTCTGTCCTCAATGATTTTCC
ACAAGTGTTTTTACAGCATCAAGAATTCAGTTTTCTCCTCAAAGAACGGGTGTGTCCGCTCGTGATCAAG
CTCTTTTCTCCAAACATCAAGTTCAGACAAGGCTCCAGTACGTCATCCTCTCCAGCACCCGTTGAAAAAC
CATATTTTCCTATTTGCATGCGTTTACTGAGAGTGGTGTCTGTTCTGATCAAGCAGTTTTACAGCCTCTT
GGTGACTGAGTGTGAAATATTTCTGTCACTTCTGGTGAAGTTTCTGGATTCAGATAAGCCACAGTGGCTT
CGAGCTGTTGCAGTGGAGTCGATACACAGGCTCTGTGTGCAGCCTCAGTTACTAAGGTCATTTTGTCAGT
CGTATGACATGAAGCAACATTCCACCAAGGTTTTCCGAGACATTGTGAATGCACTGGGGTCTTTTATCCA
GTCTCTGTTTCTTGTCCCTCCTACTGGAAATCCTGCCACAGCCAACCAAGCTGGAAACAATAATGCTGGC
GGCCCAGCCTCAGCACCAGCTAACTCGGGGGTGGTGGGCGTCGGTGGGGGCGTTACTCTGCTGCCAGCCT
TTGAGTATCGAGGAGCCTGGATACCCATCCTGACCGTTACCGTTCAAGGCAGTGCTAAAGCCACCTACCT
AGAGATGCTGGACAAAGTTGAACCCCCAACTATCCCAGAAGGCTATGCCATGTCCGTGGCCTTCCACTGT
CTGTTGGATCTTGTCCGTGGAATCACCACCATGATAGAAGGAGAGTTGGGAGAGGTAGAAGCAGAGGGTC
CCAGTGTCACAGAGGGAGCCTCTTCACAGTCGTCAGAACGGCGAGACGAGCAGGCGGCATCCGACCCGAT
GGACCAGGAAACAGCAGTGAGCAGAGCTGTTTGGGAAGAGATGGTGAGCGCTTGCTGGTGTGGCCTTCTC
GCTGCGCTCTCGCTCCTCCTCGACGCCAGCACAGATGAGGCTGCCACCGAGAACATTTTGAAGGCTGAAC
TGACCATGGCTGCTCTCTGTGGAAGACTGGGCCTTGTGACCTCGAGAGACGCCTTTATAACTGCAATATG
CAAAGGCTCCTTGCCGCCACACTATGCTCTGACTGTGCTGAACGCCACCACTGCGGCGACACTCTCCAAT
AAATCATATTCTATCCAGGGCCAAAGTGTTATGATGATCAGCCCGTCCAGCGAGTCTCACCAGCAAGTTG
TGGCCGTGGGTCAGCCTCTTGCAGTGCAGCCTCAAGGAACAGTGATGCTGACTTCCAAAAATATTCAGTG
CATGAGGACTCTGCTGAACTTGGCCCACTGTCACGGCGCTGTTCTTGGAACATCATGGCAACTTGTTCTG
GCAACTCTTCAGCATCTTGTGTGGATTCTGGGACTAAAGCCTAGTAGTGGTGGTGCCTTGAAGCCTGGCA
GAGCAGTAGAAGGGCCCAGCACAGTTCTGACAACAGCGGTGATGACGGACTTGCCAGTGATCTCCAACAT
CCTTTCTAGACTGTTTGAAAGCTCACAGTATCTTGATGACGTATCTTTGCATCATTTAATAAATGCACTT
TGTTCCTTATCTCTAGAAGCAATGGATATGGCCTATGGAAATAATAAGGAGCCATCTCTCTTTGCTGTTG
CCAAACTATTAGAAACTGGTCTTGTTAATATGCACAGGATAGAGATTTTATGGAGACCTCTGACTGGCCA
TCTACTTGAGGTCTGCCAGCATCCAAACTCTCGGATGCGGGAGTGGGGAGCAGAAGCTTTGACGTCACTC
ATTAGAGCGGGGCTGACGTTCAGCCATGAGCCTCCACTTCCACAGAACCAGAGACTACAGCTGCTTTTAT
TGAACCCATTAAAAGAGATGTCCAATATTAACCATCCAGATATTCGACTCAAGCAATTAGAATGTGTGTT
GCAGATTCTGCAAAGCCAGGGAGACAGTCTTGGGCCTGGGTGGCCGTTAGTTCTTGGAGTCATGGGAGCA
ATCAGAAATGATCAAGGAGAATCATTAATAAGAACTGCCTTTCAGTGTCTTCAGTTGGTTGTGACAGATT
TTCTACCCACAATGCCTTGTTCTTGCCTACAGATAGTTGTAGATGTTGCAGGTAGCTTTGGACTGCATAA
CCAAGAACTTAATATTAGCTTAACGTCAATAGGCTTATTGTGGAATATATCAGATTATTTTTTCCAAAGA
GGGGAAACGATTGAAAAAGAATTAAATAAAGAAGAGGCAGCTCAGCAGAAGCAGGCCGAGGAGAAAGGAG
TGTCTCTGAACCGGCCGTTCCACCCCGCGCCACCGTTCGACTGCTTGTGGCTCTGCCTCTATGCCAAGCT
GGGGGAGCTTTGTGTGGACCCCCGCCCTGCCGTGAGGAAGAGCGCAGGGCAGACCCTGTTCTCCACGATC
GGAGCGCACGGGACCCTGCTGCAGCACTCCACCTGGCACACCGTTATTTGGAAGGTACTCTTTCATCTAC
TGGACCGAGTTCGAGAATCTTCTACAACTGCAGACAAAGAAAAGATTGAGTCTGGAGGTGGAAATATTTT
AATTCATCACTCAAGAGACACGGCAGAGAAGCAGTGGGCTGAGACCTGGGTATTGACATTGGCTGGAGTA
GCACGGATCTTCAACACCAGGAGATACTTGCTGCAGCCTCTAGGAGACTTCTCAAGAGCTTGGGATGTTC
TTCTTGACCACATCCAGTCAGCTGCACTCAGTAAAAACAATGAAGTGTCCCTGGCCGCTCTGAAAAGCTT
CCAGGAGATATTACAGATTGTGTCCCCTGTCCGAGACTCAGAGAAGCCCGAGCCCCCTGCCGTTAGCGTG
CCCGTACCCGTCCTTCTAGGAAACCTTTCCGGCCCAGGCCTGAGCAGGCCGTTTGTGAGGACAGACTCCA
TTGGAGAAAAGCTTGGCAGATGCGGCTCGGAGACGCCTGTGGTGACTGACGAGCTGGAAGATCTGAAGCT
CTGGTGGGCTGCCTGGAACACCTGGCACAGGACTGGATCTGAAAGCACAGAGCCGCCCAGCTCCGTCGAT
GAGCTGACCTTTATCCCCAGCCAGCCTTTCCTTACAGCCTTAGTTCAGATCTTCCCTGCCCTCTACCAGC
ACATAAAAGCTGGCTTCAGCATGGCCGACTTGCAGAAGCTGGGCGTCATCCTGCACAGCGCTGTCTCTGT
CCCCATCAGTTCTGACGCCTCTCCTTTCATCCTTCCGTCTTACACGGAAGCAGTCCTGACAAGTTTACAG
GAAGCTGTGCTTACGGCCTTAGACGTTCTCCAGAAGGCCATCTGTGTTGGACCAGAAAACATGCAGATCA
TGTACCCGGCTATATTTGACCAGTTGCTGGCGTTCGTAGAGTTTTCCTGTAAACCTCCACAGTATGGACA
GCTGGAAACAAAGCACATTGCAAATGCCAAGTACAACCAGGCGGAATGGGTAGCCTTGAATTATGTACCG
TTTGCTGAAAGATCTTTAGAAGTAGTTGTGGATTTGTATCAAAAAACGGCTTGTCATAAAGCAGTGGTGA
ATGAGAAAGTCCTCCAGAATATTATTAAGACTCTCAGGGTTCCTCTCAGTTTGAAGTATTCATGCCCTTC
TGAAAGCACGTGGAAACTGGCGGTAGCCTCTCTCCTCAAAGTCCTGTCCATCGGACTGCCCGTTGCCCGA
CAGCATGCTTCCTCGGGGAAATTTGACAGCATGTGGCCAGAGTTAGCCAGCACGCTTGAAGACTTTCTCT
TTACTAAAAGCATACCTCCAGATAATCTCTCTATTCAAGAATTTCAAAGAAATGAAAGTATTGATGTTGA
AGTTGTTCAGCTCATCAGTGCGGAGATCCTCCCGTATGCCAACCTCATTCCTAAAGCGTTCGTGGGTCAG
ATGATGACCATGCTCAACAAGGGCTCCATCCACTCTCAGCCGTGCTCATTCACAGAAGCAGAAATTGACA
TTCGTTTGAGAGAAGAATTTTCTAAAATGTGTTTTGAAACATTGCTCCAGTTTTCCTTCAGTAACAAAGT
CACAACACCCCAGGAAGGCTACATCTCACGAATGGCACTCTCTGTGCTTTTAAAGAGGTCTCAGGATGTT
CTGCATCGCTACATAGAGGATGAGAGGCTGAGTGGAAAATGCCCTCTCCCAAGGCAGCAAGTGACAGAAA
TCATATTCGTTCTAAAAGCTGTCAGCACTCTCATCGACTCACTGAAGAAGACCCAGCCCGAGAATGTTGA
TGGCAATACCTGGTCACAAGTGATTGCCTTGTATCCGACGTTGGTGGAGTGCATCACCTGCTCATCCTCA
GACGTCGGCTCTGCCCTGAAAGAGGCACTGGCTCCCTTTAAGGACTTCATGCAGCCGCCAGCATCCAGAG
TTCAAAATGGAGAGTCTTGA

Translation (1709 aa):
MSCTNSPEAVKKLLENMQSDLRALSLECKKKFPPVKEAAESGIIKVKTIAARNTEILAALKENSSEVVQP
FLMGCGTKEPKITQLCLAAIQRLMSHEVVSETAAGNIINMLWQLMENSLEELKLLQTVLVLLTTNTVVHD
EALSKAIVLCFRLHFTKDNITNNTAAATVRQVVTVVFERMVAEDDRHRDIEPPVPIQGNSNRRSVSTLRP
CAKDAYMLFQDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVIK
LFSPNIKFRQGSSTSSSPAPVEKPYFPICMRLLRVVSVLIKQFYSLLVTECEIFLSLLVKFLDSDKPQWL
RAVAVESIHRLCVQPQLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQSLFLVPPTGNPATANQAGNNNAG
GPASAPANSGVVGVGGGVTLLPAFEYRGAWIPILTVTVQGSAKATYLEMLDKVEPPTIPEGYAMSVAFHC
LLDLVRGITTMIEGELGEVEAEGPSVTEGASSQSSERRDEQAASDPMDQETAVSRAVWEEMVSACWCGLL
AALSLLLDASTDEAATENILKAELTMAALCGRLGLVTSRDAFITAICKGSLPPHYALTVLNATTAATLSN
KSYSIQGQSVMMISPSSESHQQVVAVGQPLAVQPQGTVMLTSKNIQCMRTLLNLAHCHGAVLGTSWQLVL
ATLQHLVWILGLKPSSGGALKPGRAVEGPSTVLTTAVMTDLPVISNILSRLFESSQYLDDVSLHHLINAL
CSLSLEAMDMAYGNNKEPSLFAVAKLLETGLVNMHRIEILWRPLTGHLLEVCQHPNSRMREWGAEALTSL
IRAGLTFSHEPPLPQNQRLQLLLLNPLKEMSNINHPDIRLKQLECVLQILQSQGDSLGPGWPLVLGVMGA
IRNDQGESLIRTAFQCLQLVVTDFLPTMPCSCLQIVVDVAGSFGLHNQELNISLTSIGLLWNISDYFFQR
GETIEKELNKEEAAQQKQAEEKGVSLNRPFHPAPPFDCLWLCLYAKLGELCVDPRPAVRKSAGQTLFSTI
GAHGTLLQHSTWHTVIWKVLFHLLDRVRESSTTADKEKIESGGGNILIHHSRDTAEKQWAETWVLTLAGV
ARIFNTRRYLLQPLGDFSRAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQIVSPVRDSEKPEPPAVSV
PVPVLLGNLSGPGLSRPFVRTDSIGEKLGRCGSETPVVTDELEDLKLWWAAWNTWHRTGSESTEPPSSVD
ELTFIPSQPFLTALVQIFPALYQHIKAGFSMADLQKLGVILHSAVSVPISSDASPFILPSYTEAVLTSLQ
EAVLTALDVLQKAICVGPENMQIMYPAIFDQLLAFVEFSCKPPQYGQLETKHIANAKYNQAEWVALNYVP
FAERSLEVVVDLYQKTACHKAVVNEKVLQNIIKTLRVPLSLKYSCPSESTWKLAVASLLKVLSIGLPVAR
QHASSGKFDSMWPELASTLEDFLFTKSIPPDNLSIQEFQRNESIDVEVVQLISAEILPYANLIPKAFVGQ
MMTMLNKGSIHSQPCSFTEAEIDIRLREEFSKMCFETLLQFSFSNKVTTPQEGYISRMALSVLLKRSQDV
LHRYIEDERLSGKCPLPRQQVTEIIFVLKAVSTLIDSLKKTQPENVDGNTWSQVIALYPTLVECITCSSS
DVGSALKEALAPFKDFMQPPASRVQNGES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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