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Report for CCDS48214.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48214.1 Public Mus musculus 1 Npbwr1 23 108 98 CCDS HistoryNCBI Gene:226304Re-query CCDS DB by CCDS ID:48214.1Re-query CCDS DB by GeneID:226304See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48214.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044180.4 ENSMUSP00000046233.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044180.4Link to Ensembl Protein Viewer:ENSMUSP00000046233.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000044180Re-query CCDS DB by Protein ID:ENSMUSP00000046233
Original member Current member NCBI NM_010342.1 NP_034472.1 Accepted alive Link to Nucleotide Sequence:NM_010342.1Link to Protein Sequence:NP_034472.1Re-query CCDS DB by Nucleotide ID:NM_010342Re-query CCDS DB by Protein ID:NP_034472Link to BLAST:NP_034472.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034472.1 329 P49681 329 100% 0 0

Chromosomal Locations for CCDS 48214.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 5916304 5917293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGCATAACTTAACGCTTTTCGAGTCTGGAGGGGACAACGTGTCTTGCGGCGGCTCATCTTTGGGCTGTC
CCAACGGGTCCAGCCTGGCTCCTCTGCCGCTGCCGCAGCCACTGGCGGTAGCAGTGCCTGTCGTCTACGG
GGTAATTTGCGCCGTGGGACTGGCTGGCAACTCTGCGGTGCTGTACGTACTGCTGCGCACGCCGCGCATG
AAGACTGTCACCAACGTGTTCATCCTCAACCTGGCTATCGCCGATGAGCTCTTCACCCTCGTGCTGCCCA
TCAACATCGCGGACTTCCTGCTGAGGCGCTGGCCCTTCGGGGAGGTCATGTGCAAGCTCATTGTAGCCGT
CGACCAGTACAACACTTTCTCTAGCCTCTACTTCCTCGCCGTCATGAGCGCCGACCGATACCTGGTGGTT
CTGGCCACAGCAGAGTCGCGCCGGGTGTCCGGGCGCACTTACGGTGCAGCGCGTGCTGTCAGTCTGGCGG
TGTGGGCGCTGGTGACGCTGGTCGTGCTGCCCTTTGCGGTATTCGCTCGGCTGGACGAGGAGCAGGGTCG
GCGCCAGTGCGTGCTGGTCTTCCCGCAGCCCGAGGCCTTCTGGTGGCGTGCCAGCCGTCTCTACACACTA
GTATTGGGCTTTGCCATCCCGGTGACCACCATCTGTGCTCTCTATACCACTCTGCTCTGCCGACTGCGTG
CTATCCAGCTAGATAGCCACGCCAAGGCCCTGGATCGTGCCAAGAAGCGCGTGACCTTGTTGGTGGCGGC
GATTCTGGCTGTGTGCCTCCTCTGCTGGACGCCTTATCACCTGAGTACCATAGTGGCCCTCACCACCGAC
CTCCCGCAAACGCCGCTGGTCATCGGCATCTCTTACTTCATCACCAGCCTGAGCTATGCTAACAGCTGCC
TCAACCCTTTCCTCTATGCCTTCCTGGACGACAGCTTCCGCAGAAGCCTCCGGCAATTGGTGTCATGCCG
TTCAGCCTGA

Translation (329 aa):
MHNLTLFESGGDNVSCGGSSLGCPNGSSLAPLPLPQPLAVAVPVVYGVICAVGLAGNSAVLYVLLRTPRM
KTVTNVFILNLAIADELFTLVLPINIADFLLRRWPFGEVMCKLIVAVDQYNTFSSLYFLAVMSADRYLVV
LATAESRRVSGRTYGAARAVSLAVWALVTLVVLPFAVFARLDEEQGRRQCVLVFPQPEAFWWRASRLYTL
VLGFAIPVTTICALYTTLLCRLRAIQLDSHAKALDRAKKRVTLLVAAILAVCLLCWTPYHLSTIVALTTD
LPQTPLVIGISYFITSLSYANSCLNPFLYAFLDDSFRRSLRQLVSCRSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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