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Report for CCDS48041.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48041.1 Public Homo sapiens 9 GPR107 24 110 108 CCDS HistoryNCBI Gene:57720Re-query CCDS DB by CCDS ID:48041.1Re-query CCDS DB by GeneID:57720See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48041.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372406.5 ENSP00000361483.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372406.5Link to Ensembl Protein Viewer:ENSP00000361483.1Re-query CCDS DB by Nucleotide ID:ENST00000372406Re-query CCDS DB by Protein ID:ENSP00000361483
Original member Current member NCBI NM_001136557.2 NP_001130029.1 Accepted alive Link to Nucleotide Sequence:NM_001136557.2Link to Protein Sequence:NP_001130029.1Re-query CCDS DB by Nucleotide ID:NM_001136557Re-query CCDS DB by Protein ID:NP_001130029Link to BLAST:NP_001130029.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001130029.1 600 Q5VW38-1 600 100% 0 0

Chromosomal Locations for CCDS 48041.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 130053933 130054073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130075636 130075749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130076412 130076462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130077299 130077378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130079630 130079769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130083565 130083602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130086420 130086476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130090876 130090983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130092248 130092381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130099457 130099532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130100629 130100702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130101106 130101223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130104420 130104550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130107496 130107539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130110370 130110426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130114577 130114663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130124915 130124964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130127483 130127566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130128640 130128761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130135025 130135121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGGCCGCTCTGGCGCCCGTCGGCTCCCCCGCCTCCCGCGGTCCTAGGCTGGCCGCGGGCCTCCGGCTGC
TCCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCCTGGCCTGGGCCGCGTCCATCACCTGGCACTCAA
GGATGATGTGAGGCATAAAGTTCATCTGAACACCTTTGGCTTCTTCAAGGATGGGTACATGGTGGTGAAT
GTCAGTAGCCTCTCACTGAATGAGCCTGAAGACAAGGATGTGACTATTGGATTTAGCCTAGACCGTACAA
AGAATGATGGCTTTTCTTCTTACCTGGATGAAGATGTGAATTACTGTATTTTAAAGAAACAGTCTGTCTC
TGTCACCCTTTTAATCCTAGACATCTCCAGAAGTGAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC
CAGTTACCAAAGATCATCTTCAGCAGGGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAATGTTAACC
CTGCTTCAGCAGGCAACCAGACCCAGAAGACACAAGATGGTGGAAAGTCTAAAAGAAGTACAGTGGATTC
AAAGGCCATGGGAGAGAAATCCTTTTCTGTTCATAATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT
AACATCAGCACTGATGACCAAGAAGGCCTTTACAGTCTTTATTTTCATAAATGCCTTGGAAAAGAATTGC
CAAGTGACAAGTTTACATTCAGCCTTGATATTGAGATCACAGAGAAGAATCCTGACAGCTACCTCTCAGC
AGGAGAAATTCCTCTCCCCAAATTATACATCTCAATGGCCTTTTTCTTCTTTCTTTCTGGGACCATCTGG
ATTCATATCCTTCGAAAACGACGGAATGATGTATTTAAAATCCACTGGCTGATGGCGGCCCTTCCTTTCA
CCAAGTCTCTTTCCTTGGTGTTCCATGCAATTGACTACCACTACATCTCCTCCCAGGGCTTCCCTATCGA
AGGCTGGGCTGTTGTGTACTACATAACTCACCTTTTGAAAGGGGCGCTACTCTTCATCACCATTGCACTC
ATTGGCACTGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAAAGACAAAAAGATCTTCATGATTGTCA
TTCCACTCCAGGTCCTGGCAAATGTAGCCTACATCATCATAGAGTCCACCGAGGAGGGCACGACTGAATA
TGGCTTGTGGAAGGACTCTCTATTTCTGGTCGACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGGTG
TGGTCAATCAGACATTTACAAGAAGCATCAGCAACAGATGGAAAAGGTGACAGCATGGGACCTCTTCAGC
AGAGAGCGAATCTAAGAGCAGGAAGTCGCATAGAGTCTCACCATTTTGCCCAGGCTGATCTTGAACTCCT
GGCCTCTAGCTGTCCTCCTGCCTCAGTCTCCCAAAGGGCTGGGATTACAGCTGCTATTAACTTAGCAAAG
CTGAAACTTTTCAGACATTATTACGTCTTGATTGTGTGTTACATATACTTCACTAGGATCATTGCATTTC
TCCTCAAACTCGCTGTTCCATTCCAGTGGAAGTGGCTCTACCAGCTCCTGGATGAAACGGCCACACTGGT
CTTCTTTGTTCTAACGGGGTATAAATTCCGTCCGGCTTCAGATAACCCCTACCTACAACTTTCTCAGGAA
GAAGAAGACTTGGAAATGGAGTCCGTTGTGACAACATCTGGGGTGATGGAAAGTATGAAGAAAGTCAAGA
AGGTGACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGGCGCCGTGTGA

Translation (600 aa):
MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFGFFKDGYMVVN
VSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTLLILDISRSEVRVKSPPEAGT
QLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKSKRSTVDSKAMGEKSFSVHNNGGAVSFQFFF
NISTDDQEGLYSLYFHKCLGKELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIW
IHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIAL
IGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV
WSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRAGITAAINLAK
LKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPYLQLSQE
EEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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