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Report for CCDS48033.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48033.1 Public Homo sapiens 9 CIZ1 24 110 108 CCDS HistoryNCBI Gene:25792Re-query CCDS DB by CCDS ID:48033.1Re-query CCDS DB by GeneID:25792See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48033.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372954.5 ENSP00000362045.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372954.5Link to Ensembl Protein Viewer:ENSP00000362045.1Re-query CCDS DB by Nucleotide ID:ENST00000372954Re-query CCDS DB by Protein ID:ENSP00000362045
Original member Current member NCBI NM_001131018.2 NP_001124490.1 Accepted alive Link to Nucleotide Sequence:NM_001131018.2Link to Protein Sequence:NP_001124490.1Re-query CCDS DB by Nucleotide ID:NM_001131018Re-query CCDS DB by Protein ID:NP_001124490Link to BLAST:NP_001124490.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124490.1 818 Q9ULV3-3 818 100% 0 0

Chromosomal Locations for CCDS 48033.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128166197 128166406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128166759 128166880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128167095 128167164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169052 128169201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128169406 128169519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128170020 128170107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128176351 128176475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128177566 128177763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128178369 128178490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128178709 128178904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128179073 128179415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128180415 128180523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128180721 128180814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128185547 128185776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128190329 128190444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128190688 128190857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2457 nt):
ATGTTCAGCCAGCAGCAGCAGCAGCAGCTCCAGCAACAGCAGCAGCAGCTCCAGCAGTTACAGCAGCAGC
AGCTCCAGCAGCAGCAATTGCAGCAGCAGCAGTTACTGCAGCTCCAGCAGCTGCTCCAGCAGTCCCCACC
ACAGGCCCCGTTGCCCATGGCTGTCAGCCGGGGGCTCCCCCCGCAGCAGCCACAGCAGCCGCTTCTGAAT
CTCCAGGGCACCAACTCAGCCTCCCTCCTCAACGGCTCCATGCTGCAGAGAGCTTTGCTTTTACAGCAGT
TGCAAGGTAACCTCCGAGGCTATGGCATGGCATCCCCAGGCCTCGCAGCCCCCAGCCTCACACCCCCACA
ACTGGCCACTCCAAATTTGCAACAGTTCTTTCCCCAGGCCACTCGCCAGTCCTTGCTGGGACCTCCTCCT
GTTGGGGTCCCCATGAACCCTTCCCAGTTCAACCTTTCAGGACGGAACCCCCAGAAACAGGCCCGGACCT
CCTCCTCTACCACCCCCAATCGAAAGGATTCTTCTTCTCAGACAATGCCTGTGGAAGACAAGTCAGACCC
CCCAGAGGGGTCTGAGGAAGCCGCAGAGCCCCGGATGGACACACCAGAAGACCAAGATTTACCGCCCTGC
CCAGAGGACATCGCCAAGGAAAAACGCACTCCAGCACCTGAGCCTGAGCCTTGTGAGGCGTCCGAGCTGC
CAGCAAAGAGATTGAGGAGCTCAGAAGAGCCCACAGAGAAGGAACCTCCAGGGCAGTTACAGGTGAAGGC
CCAGCCGCAGGCCCGGATGACAGTACCGAAACAGACACAGACACCAGACCTGCTGCCTGAGGCCCTGGAA
GCCCAAGTGCTGCCACGATTCCAGCCACGGGTCCTGCAGGTCCAGGCCCAGGTGCAGTCACAGACTCAGC
CGCGGATACCATCCACAGACACCCAGGTGCAGCCAAAGCTGCAGAAGCAGGCGCAAACACAGACCTCTCC
AGAGCACTTAGTGCTGCAACAGAAGCAGGTGCAGCCACAGCTGCAGCAGGAGGCAGAGCCACAGAAGCAG
GTGCAGCCACAGGTCCACACACAGGCACAGCCAAGCGTCCAGCCACAGGAGCATCCTCCAGCGCAGGTGT
CAGTACAGCCACCAGAGCAGACCCATGAGCAGCCTCACACCCAGCCGCAGGTGTCGTTGCTGGCTCCAGA
GCAAACACCAGTTGTGGTTCATGTCTGCGGGCTGGAGATGCCACCTGATGCAGTAGAAGCTGGTGGAGGC
ATGGAAAAGACCTTGCCAGAGCCTGTGGGCACCCAAGTCAGCATGGAAGAGATTCAGAATGAGTCGGCCT
GTGGCCTAGATGTGGGAGAATGTGAAAACAGAGCGAGAGAGATGCCAGGGGTATGGGGCGCCGGGGGCTC
CCTGAAGGTCACCATTCTGCAGAGCAGTGACAGCCGGGCCTTTAGCACTGTACCCCTGACACCTGTCCCC
CGCCCCAGTGACTCCGTCTCCTCCACCCCTGCGGCTACCAGCACTCCCTCTAAGCAGGCCCTCCAGTTCT
TCTGCTACATCTGCAAGGCCAGCTGCTCCAGCCAGCAGGAGTTCCAGGACCACATGTCGGAGCCTCAGCA
CCAGCAGCGGCTAGGGGAGATCCAGCACATGAGCCAAGCCTGCCTCCTGTCCCTGCTGCCCGTGCCCCGG
GACGTCCTGGAGACAGAGGATGAGGAGCCTCCACCAAGGCGCTGGTGCAACACCTGCCAGCTCTACTACA
TGGGGGACCTGATCCAACACCGCAGGACACAGGACCACAAGATTGCCAAACAATCCTTGCGACCCTTCTG
CACCGTTTGCAACCGCTACTTCAAAACCCCTCGCAAGTTTGTGGAGCACGTGAAGTCCCAGGGGCATAAG
GACAAAGCCAAGGAGCTGAAGTCGCTTGAGAAAGAAATTGCTGGCCAAGATGAGGACCACTTCATTACAG
TGGACGCTGTGGGTTGCTTCGAGGGTGATGAAGAAGAGGAAGAGGATGATGAGGATGAAGAAGAGATCGA
GGTTGAGGAGGAACTCTGCAAGCAGGTGAGGTCCAGAGATATATCCAGAGAGGAGTGGAAGGGCTCGGAG
ACCTACAGCCCCAATACTGCATATGGTGTGGACTTCCTGGTGCCCGTGATGGGCTATATCTGCCGCATCT
GCCACAAGTTCTATCACAGCAACTCAGGGGCACAGCTCTCCCACTGCAAGTCCCTGGGCCACTTTGAGAA
CCTGCAGAAATACAAGGCGGCCAAGAACCCCAGCCCCACCACCCGACCTGTGAGCCGCCGGTGCGCAATC
AACGCCCGGAACGCTTTGACAGCCCTGTTCACCTCCAGCGGCCGCCCACCCTCCCAGCCCAACACCCAGG
ACAAAACACCCAGCAAGGTGACGGCTCGACCCTCCCAGCCCCCACTACCTCGGCGCTCAACCCGCCTCAA
AACCTGA

Translation (818 aa):
MFSQQQQQQLQQQQQQLQQLQQQQLQQQQLQQQQLLQLQQLLQQSPPQAPLPMAVSRGLPPQQPQQPLLN
LQGTNSASLLNGSMLQRALLLQQLQGNLRGYGMASPGLAAPSLTPPQLATPNLQQFFPQATRQSLLGPPP
VGVPMNPSQFNLSGRNPQKQARTSSSTTPNRKDSSSQTMPVEDKSDPPEGSEEAAEPRMDTPEDQDLPPC
PEDIAKEKRTPAPEPEPCEASELPAKRLRSSEEPTEKEPPGQLQVKAQPQARMTVPKQTQTPDLLPEALE
AQVLPRFQPRVLQVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQ
VQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTPVVVHVCGLEMPPDAVEAGGG
MEKTLPEPVGTQVSMEEIQNESACGLDVGECENRAREMPGVWGAGGSLKVTILQSSDSRAFSTVPLTPVP
RPSDSVSSTPAATSTPSKQALQFFCYICKASCSSQQEFQDHMSEPQHQQRLGEIQHMSQACLLSLLPVPR
DVLETEDEEPPPRRWCNTCQLYYMGDLIQHRRTQDHKIAKQSLRPFCTVCNRYFKTPRKFVEHVKSQGHK
DKAKELKSLEKEIAGQDEDHFITVDAVGCFEGDEEEEEDDEDEEEIEVEEELCKQVRSRDISREEWKGSE
TYSPNTAYGVDFLVPVMGYICRICHKFYHSNSGAQLSHCKSLGHFENLQKYKAAKNPSPTTRPVSRRCAI
NARNALTALFTSSGRPPSQPNTQDKTPSKVTARPSQPPLPRRSTRLKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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