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Report for CCDS48008.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48008.1 Public Homo sapiens 9 ZNF618 24 110 108 CCDS HistoryNCBI Gene:114991Re-query CCDS DB by CCDS ID:48008.1Re-query CCDS DB by GeneID:114991See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 48008.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288466.11 ENSP00000288466.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000288466.11Link to Ensembl Protein Viewer:ENSP00000288466.7Re-query CCDS DB by Nucleotide ID:ENST00000288466Re-query CCDS DB by Protein ID:ENSP00000288466
Original member Current member NCBI NM_133374.3 NP_588615.2 Accepted alive Link to Nucleotide Sequence:NM_133374.3Link to Protein Sequence:NP_588615.2Re-query CCDS DB by Nucleotide ID:NM_133374Re-query CCDS DB by Protein ID:NP_588615Link to BLAST:NP_588615.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_588615.2 861 Q5T7W0-2 861 100% 0 0

Chromosomal Locations for CCDS 48008.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113876381 113876413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113969117 113969160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113988321 113988580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114001996 114002073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114002624 114002662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114007350 114007439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114008344 114008379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114008477 114008554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114016113 114016172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114016695 114016784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114032648 114032728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114036300 114036377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114047893 114047994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114048651 114050167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2586 nt):
ATGAACCAGCCGGGCGGCGCGGCGGCTCCGCAGGCTGACGGAGCCAGTGCAGCCGGAAGGAAAAGCACTG
CGAGCAGGGAGCGCTTGAAGCGCAGCCAGAAGAGCACCAAGGTGGAGGGCCCAGAGCCAGTGCCAGCCGA
GGCCTCGCTGAGTGCCGAGCAAGGAACGATGACGGAGGTGAAGGTGAAGACAGAGCTGCCCGATGACTAC
ATCCAGGAGGTGATCTGGCAGGGCGAGGCCAAGGAGGAGAAGAAGGCGGTCAGCAAGGATGGGACCAGCG
ACGTGCCTGCCGAGATCTGCGTGGTGATCGGCGGCGTCCGCAACCAGCAGACCCTTGGGTCTTACGAATG
CGGAATCTGTGGCAAGAAGTACAAGTATTACAACTGCTTCCAGACCCACGTGCGGGCGCACCGAGACACC
GAAGCCACCTCAGGGGAGGGAGCCTCCCAAAGCAACAATTTCAGGTACACATGTGATATCTGCGGGAAGA
AGTACAAATACTACAGCTGTTTCCAAGAGCACCGAGACCTGCACGCAGTGGATGTGTTTAGTGTGGAAGG
GGCCCCTGAGAACCGGGCAGACCCCTTCGACCAAGGTGTCGTGGCCACGGACGAGGTGAAGGAGGAGCCC
CCGGAGCCATTCCAGAAAATCGGGCCAATGAACAATATTACATCAGACATTTTTAAGAAGAAAGAAGTTA
GGCAGTGCCAAAAGAGAGAAACTGGCAATTACACCTGTGAATTCTGCGGCAAACAGTACAAGTACTACAC
TCCCTACCAGGAGCATGTGGCCTTACACGCCCCCATCAAAAGCGCTTTCAGTCGGAGAGTAGAAGGCAAA
GCACAAAACCACTTTGAAGAGACGAACAGCAGTTCGCAGAACTCCAGCGAACCCTACACCTGCGGCGCCT
GTGGGATCCAGTTCCAGTTCTACAACAACCTGTTGGAGCACATGCAGTCCCATGCAGCTGACAATGAAAA
CAACATTGCCTCCAACCAGTCCCGATCGCCACCTGCTGTTGTAGAAGAGAAGTGGAAACCTCAGGCCCAG
AGGAACAGTGCCAATAACACCACTACCAGTGGTTTAACACCCAACAGCATGATCCCCGAAAAGGAGCGGC
AGAACATCGCAGAGCGGCTGTTGAGGGTCATGTGTGCCGACCTGGGTGCACTGAGCGTGGTCAGCGGGAA
GGAGTTCCTGAAGTTGGCCCAGACCTTAGTAGACAGTGGTGCCCGCTATGGGGCCTTCTCGGTCACTGAA
ATCCTGGGCAACTTCAACACGCTGGCGCTGAAGCACCTGCCACGCATGTACAACCAGGTGAAGGTGAAAG
TGACCTGTGCCTTGGGCAGCAATGCCTGCCTAGGCATCGGTGTCACCTGCCACTCCCAGAGTGTTGGCCC
TGACTCCTGCTACATCCTCACAGCCTACCAGGCCGAGGGCAACCACATCAAGAGCTATGTGCTTGGTGTG
AAGGGTGCGGACATTCGCGACAGCGGTGACCTTGTGCACCACTGGGTGCAGAACGTGCTGTCGGAGTTCG
TGATGTCGGAGATCAGGACAGTGTACGTGACGGATTGCCGGGTGAGCACGTCCGCCTTCTCCAAGGCCGG
CATGTGCCTTCGCTGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCGGACACTG
CAGGCCCGCAGCATGCACGAGGTCATCGAGCTGCTCAACGTGTGCGAGGACCTGGCGGGCTCCACGGGCC
TGGCCAAGGAGACCTTCGGGTCGCTGGAGGAGACGTCTCCACCACCCTGCTGGAACTCGGTGACGGACTC
ACTGTTGCTGGTGCATGAGCGCTATGAGCAGATCTGCGAGTTCTACAGCCGGGCCAAGAAGATGAACCTC
ATCCAGAGCCTCAACAAGCACCTGCTCAGCAACCTGGCGGCCATCCTGACGCCGGTGAAGCAGGCAGTCA
TCGAGCTGAGCAACGAGAGCCAGCCCACCCTGCAGCTGGTGCTGCCCACCTACGTCAGGCTGGAGAAGCT
GTTCACGGCCAAGGCCAACGACGCAGGCACTGTCAGCAAGCTCTGCCACCTCTTCCTGGAGGCGCTCAAG
GAGAACTTCAAGGTGCACCCGGCCCACAAGGTGGCCATGATCCTGGACCCGCAGCAGAAGCTGCGGCCTG
TGCCACCCTACCAGCACGAGGAGATCATCGGCAAGGTCTGTGAGCTCATCAACGAGGTGAAGGAGTCCTG
GGCCGAGGAGGCCGACTTCGAGCCCGCTGCCAAGAAGCCCCGCTCTGCTGCCGTCGAGAACCCCGCAGCT
CAGGAAGATGATCGGCTAGGCAAAAATGAAGTGTACGATTACCTGCAGGAGCCCCTCTTCCAGGCTACCC
CTGATCTCTTCCAGTACTGGTCGTGCGTTACCCAAAAGCACACAAAACTCGCCAAGCTCGCCTTCTGGCT
CCTGGCGGTTCCGGCCGTGGGCGCCAGAAGCGGGTGTGTAAATATGTGTGAACAAGCGCTTCTAATCAAA
CGGAGGCGGCTGCTCAGTCCAGAAGATATGAATAAACTCATGTTTCTGAAATCCAACATGCTTTAA

Translation (861 aa):
MNQPGGAAAPQADGASAAGRKSTASRERLKRSQKSTKVEGPEPVPAEASLSAEQGTMTEVKVKTELPDDY
IQEVIWQGEAKEEKKAVSKDGTSDVPAEICVVIGGVRNQQTLGSYECGICGKKYKYYNCFQTHVRAHRDT
EATSGEGASQSNNFRYTCDICGKKYKYYSCFQEHRDLHAVDVFSVEGAPENRADPFDQGVVATDEVKEEP
PEPFQKIGPMNNITSDIFKKKEVRQCQKRETGNYTCEFCGKQYKYYTPYQEHVALHAPIKSAFSRRVEGK
AQNHFEETNSSSQNSSEPYTCGACGIQFQFYNNLLEHMQSHAADNENNIASNQSRSPPAVVEEKWKPQAQ
RNSANNTTTSGLTPNSMIPEKERQNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGARYGAFSVTE
ILGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGV
KGADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSTSAFSKAGMCLRCSACALNSVVQSVLSKRTL
QARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNL
IQSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKLFTAKANDAGTVSKLCHLFLEALK
ENFKVHPAHKVAMILDPQQKLRPVPPYQHEEIIGKVCELINEVKESWAEEADFEPAAKKPRSAAVENPAA
QEDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIK
RRRLLSPEDMNKLMFLKSNML


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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