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Report for CCDS47948.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47948.1 Public Homo sapiens 9 ZNG1A 24 110 108 CCDS HistoryNCBI Gene:55871Re-query CCDS DB by CCDS ID:47948.1Re-query CCDS DB by GeneID:55871See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47948.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314367.14 ENSP00000323433.10 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314367.14Link to Ensembl Protein Viewer:ENSP00000323433.10Re-query CCDS DB by Nucleotide ID:ENST00000314367Re-query CCDS DB by Protein ID:ENSP00000323433
Original member Current member NCBI NM_001145355.2 NP_001138827.1 Accepted alive Link to Nucleotide Sequence:NM_001145355.2Link to Protein Sequence:NP_001138827.1Re-query CCDS DB by Nucleotide ID:NM_001145355Re-query CCDS DB by Protein ID:NP_001138827Link to BLAST:NP_001138827.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138827.1 359 Q9BRT8-2 359 100% 0 0

Chromosomal Locations for CCDS 47948.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 121467 121573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121961 122090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123217 123282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123386 123454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 134979 135030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 146102 146158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 152034 152078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 154709 154795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 156481 156527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 162432 162469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 163978 164037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 172081 172172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 173270 173366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 175698 175784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 177723 177768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGTATTTCAAACGTGCCGCTCGGGCCTTTCCCGTATTGCTCACTGGTGCTGGGAAGACAACACTTCTGA
ACTATATTTTGACAGAGCAACATAGTAAAAGAGTAGCGGTCATTTTAAATGAATTTGGGGAAGGAAGTGC
GCTGGAGAAATCCTTAGCTGTCAGCCAAGGTGGAGAGCTCTATGAAGAGTGGCTGGAACTTAGAAACGGT
TGCCTCTGCTGTTCAGTGAAGGACAGTGGCCTTAGAGCTATTGAGAATTTGATGCAAAAGAAGGGGAAAT
TTGATTACATACTGTTAGAGACCACTGGATTAGCAGACCCTGGTGCAGTGGCTTCTATGTTTTGGGTTGA
TGCTGAATTAGGGAGTGATATTTATCTTGATGGTATCATAACTATTGTGGATTCAAAATATGGATTAAAA
CATTTAACAGAAGAGAAACCTGATGGCCTTATCAATGAAGCTACTAGACAAGTTGCTTTGGCAGATGCCA
TTCTCATTAATAAAACAGACCTGGTTCCAGAAGAAGATGTAAAGAAATTAAGAACGACAATTAGATCCAT
AAATGGACTAGGACAAATCTTAGAAACACAAAGATCAAGAGTTGATCTCTCTAATGTATTAGATCTTCAT
GCCTTTGATAGTCTCTCTGGAATAAGTTTGCAGAAAAAACTTCAGCATGTGCCAGGAACACAACCTCACC
TTGATCAGAGTATTGTTACAATCACATTTGAAGTACCAGGAAATGCAAAGGAAGAACATCTTAATATGTT
TATTCAGAATCTCCTGTGGGAAAAGAATGTGAGAAACAAGGACAATCACTGCATGGAGGTCATAAGGCTG
AAGGGATTGGTGTCAATCAAAGACAAATCACAACAAGTGATTGTCCAGGGTGTCCATGAGCTCTATGATC
TGGAGGAGACTCCAGTGAGCTGGAAGGATGACACTGAGAGAACAAATCGATTGGTCCTCCTTGGCAGAAA
TTTAGATAAGGATATCCTTAAACAGCTGTTTATAGCTACTGTGACAGAAACAGAAAAGCAGTGGACAACA
CGTTTCCAAGAAGATCAAGTTTGTACATAA

Translation (359 aa):
MYFKRAARAFPVLLTGAGKTTLLNYILTEQHSKRVAVILNEFGEGSALEKSLAVSQGGELYEEWLELRNG
CLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITIVDSKYGLK
HLTEEKPDGLINEATRQVALADAILINKTDLVPEEDVKKLRTTIRSINGLGQILETQRSRVDLSNVLDLH
AFDSLSGISLQKKLQHVPGTQPHLDQSIVTITFEVPGNAKEEHLNMFIQNLLWEKNVRNKDNHCMEVIRL
KGLVSIKDKSQQVIVQGVHELYDLEETPVSWKDDTERTNRLVLLGRNLDKDILKQLFIATVTETEKQWTT
RFQEDQVCT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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