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Report for CCDS47924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47924.1 Public Homo sapiens 8 ZFAT 24 110 108 CCDS HistoryNCBI Gene:57623Re-query CCDS DB by CCDS ID:47924.1Re-query CCDS DB by GeneID:57623See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47924.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377838.8 ENSP00000367069.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377838.8Link to Ensembl Protein Viewer:ENSP00000367069.3Re-query CCDS DB by Nucleotide ID:ENST00000377838Re-query CCDS DB by Protein ID:ENSP00000367069
Original member Current member NCBI NM_020863.4 NP_065914.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020863.4Link to Protein Sequence:NP_065914.2Re-query CCDS DB by Nucleotide ID:NM_020863Re-query CCDS DB by Protein ID:NP_065914Link to BLAST:NP_065914.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065914.2 1243 Q9P243-1 1243 100% 0 0

Chromosomal Locations for CCDS 47924.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 134478482 134478721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134509619 134509749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134512475 134512601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134520883 134521001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134532834 134532972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134565333 134565421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134583832 134584005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134588246 134588395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134590268 134590355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134600436 134600668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134601477 134602933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134608729 134608879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134610470 134610655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134637461 134637712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134657561 134657737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 134712845 134712863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3732 nt):
ATGGAGACGCGGGCGGCAGAAAACACGGCCATCTTTATGTGTAAATGTTGTAACCTCTTCTCACCAAATC
AGTCGGAACTCCTCTCCCACGTTTCAGAGAAGCACATGGAAGAAGGGGTTAATGTTGATGAGATTATTAT
TCCCCTTAGGCCTCTGAGTACACCTGAACCCCCCAACTCAAGCAAAACCGGAGATGAGTTTTTGGTCATG
AAGAGGAAGAGAGGCAGGCCTAAGGGGTCCACGAAGAAGTCCAGCACAGAAGAGGAGCTGGCAGAAAACA
TCGTGAGTCCGACTGAGGACAGCCCGCTGGCTCCGGAGGAAGGGAACAGCCTGCCTCCAAGCAGCTTGGA
GTGTAGCAAGTGCTGTCGGAAGTTCTCCAACACGCGCCAGCTGCGGAAGCACATCTGCATTATCGTGCTG
AATTTGGGTGAGGAGGAAGGAGAAGCAGGTAACGAGTCTGACCTTGAACTAGAAAAGAAGTGTAAGGAAG
ATGATCGGGAAAAAGCCTCGAAAAGACCACGGTCACAGAAAACAGAGAAAGTCCAGAAGATCTCAGGAAA
GGAGGCCAGACAGCTTTCTGGGGCGAAGAAACCCATCATAAGTGTGGTTTTAACTGCACACGAAGCAATT
CCAGGTGCTACCAAGATTGTGCCAGTGGAGGCTGGGCCCCCTGAAACAGGAGCTACAAATTCTGAGACCA
CTTCAGCAGACCTGGTGCCTCGGAGAGGCTACCAGGAATACGCCATTCAGCAGACACCTTATGAGCAACC
AATGAAGTCAAGCAGGCTAGGTCCCACTCAGCTCAAAATCTTCACTTGTGAATACTGCAACAAGGTCTTC
AAGTTCAAGCACTCGCTGCAGGCCCACCTGAGGATCCACACCAATGAAAAGCCATACAAGTGCCCCCAGT
GCAGCTATGCCAGTGCCATCAAGGCCAACCTCAATGTGCACCTGCGCAAGCACACTGGAGAGAAGTTCGC
CTGCGACTATTGCTCGTTCACCTGCCTGAGCAAGGGCCACCTCAAGGTGCACATCGAGCGAGTGCACAAG
AAGATCAAGCAGCACTGCCGCTTCTGCAAGAAGAAGTACTCTGACGTCAAGAACCTCATCAAGCACATCC
GAGACGCGCATGACCCACAGGACAAGAAGGTCAAAGAGGCCTTGGACGAGCTCTGCCTGATGACGAGGGA
GGGCAAGCGGCAGCTGCTCTATGACTGCCACATCTGTGAGCGCAAGTTCAAGAACGAGCTGGACCGTGAC
CGCCATATGCTGGTCCACGGAGACAAGTGGCCTTTTGCCTGTGAGCTCTGTGGCCATGGGGCCACCAAGT
ACCAGGCGCTGGAACTGCATGTCAGGAAGCACCCCTTCGTGTACGTCTGTGCCGTCTGCCGCAAGAAGTT
CGTCAGCTCCATCAGGCTGCGCACCCACATCAAAGAGGTGCACGGGGCTGCCCAGGAGGCCTTGGTCTTC
ACCAGTTCCATCAACCAGAGCTTCTGCCTCCTGGAACCTGGTGGGGACATCCAGCAAGAAGCTCTGGGGG
ACCAGCTACAGCTGGTGGAAGAGGAGTTTGCCCTCCAGGGCGTGAATGCACTCAAGGAAGAGGCCTGTCC
TGGGGACACTCAGCTGGAGGAGGGCCGGAAGGAGCCGGAGGCCCCTGGGGAAATGCCTGCCCCAGCTGTG
CACCTGGCCTCCCCGCAGGCCGAAAGCACAGCCCTGCCACCCTGTGAGCTGGAAACCACCGTGGTCTCCT
CCTCAGACCTGCATTCTCAAGAGGTGGTTTCAGATGATTTTTTGTTGAAAAATGATACCTCCTCCGCAGA
GGCTCATGCTGCTCCTGAGAAGCCCCCAGACATGCAGCACAGAAGCTCAGTCCAGACGCAAGGTGAAGTG
ATCACACTACTGCTGTCCAAGGCCCAGAGTGCTGGGTCAGATCAGGAAAGCCATGGCGCCCAGAGCCCCC
TAGGGGAAGGGCAGAACATGGCTGTGCTTTCAGCTGGTGACCCAGATCCCAGCAGGTGTCTCAGGTCAAA
CCCAGCTGAGGCCTCAGACCTCCTCCCTCCAGTAGCTGGTGGTGGGGACACCATCACACATCAGCCTGAC
TCTTGCAAAGCTGCCCCTGAGCACCGGTCAGGCATCACCGCTTTCATGAAGGTCCTGAACAGTTTACAGA
AGAAGCAAATGAACACCAGCTTGTGTGAGCGGATCCGGAAGGTTTATGGAGACCTGGAGTGTGAATACTG
TGGCAAACTTTTTTGGTACCAAGTGCATTTTGATATGCATGTCCGCACCCACACCCGGGAACATCTGTAT
TATTGCTCTCAGTGTCATTATTCTTCCATCACCAAAAACTGCCTTAAACGCCACGTAATTCAGAAACACA
GTAACATCTTGCTGAAGTGTCCCACCGATGGCTGTGACTACTCAACTCCAGATAAATATAAGCTACAGGC
ACATCTTAAAGTTCACACAGCACTGGACAAAAGGAGTTATTCTTGTCCTGTTTGTGAAAAGTCTTTTTCA
GAGGATCGATTGATAAAGTCACATATCAAGACCAACCATCCTGAGGTCTCCATGAGCACCATTTCTGAGG
TTCTCGGGAGGAGGGTTCAGCTGAAAGGGCTAATTGGAAAGAGAGCCATGAAATGCCCATATTGTGACTT
TTATTTCATGAAGAATGGCTCAGACCTTCAGCGTCATATTTGGGCTCATGAAGGTGTGAAGCCCTTCAAG
TGTTCTTTGTGTGAGTATGCAACTCGTAGCAAGAGTAACCTCAAGGCTCATATGAATCGTCACAGCACTG
AGAAAACCCACCTATGTGACATGTGTGGCAAGAAATTCAAATCAAAAGGGACACTGAAAAGTCACAAACT
CCTTCACACTGCAGATGGGAAGCAGTTTAAGTGCACGGTGTGTGACTACACAGCGGCCCAGAAGCCACAG
CTGCTGCGGCACATGGAACAGCATGTCTCCTTCAAGCCTTTCCGCTGTGCCCATTGCCATTACTCCTGCA
ACATATCTGGCTCTCTGAAGCGGCACTACAACAGGAAGCACCCTAATGAGGAGTATGCCAACGTGGGCAC
CGGGGAGCTGGCAGCGGAGGTGCTCATCCAGCAAGGTGGTTTGAAGTGTCCTGTTTGCAGCTTTGTATAT
GGCACCAAATGGGAGTTCAATAGGCACTTGAAGAACAAACATGGCTTGAAGGTGGTGGAAATTGATGGAG
ACCCCAAGTGGGAGACAGCAACAGAAGCTCCTGAGGAGCCCTCCACCCAGTATCTCCACATCACAGAGGC
CGAAGAAGACGTTCAAGGGACACAGGCAGCGGTGGCCGCGCTCCAGGACCTGAGATACACCTCTGAGAGT
GGCGACCGACTGGACCCCACGGCCGTGAACATCCTGCAGCAGATCATTGAGCTGGGCGCCGAGACCCATG
ACGCCACTGCCCTTGCCTCGGTGGTTGCCATGGCACCAGGGACGGTGACTGTGGTTAAGCAGGTCACCGA
GGAGGAGCCCAGCTCCAACCACACGGTCATGATCCAGGAGACGGTCCAGCAAGCGTCCGTGGAGCTTGCC
GAGCAGCACCACCTGGTGGTGTCCTCCGACGACGTGGAGGGCATTGAGACGGTGACTGTCTACACGCAGG
GCGGGGAGGCCTCGGAGTTCATCGTCTACGTGCAGGAGGCCATGCAGCCTGTGGAGGAGCAGGCTGTGGA
GCAGCCGGCCCAGGAACTCTAG

Translation (1243 aa):
METRAAENTAIFMCKCCNLFSPNQSELLSHVSEKHMEEGVNVDEIIIPLRPLSTPEPPNSSKTGDEFLVM
KRKRGRPKGSTKKSSTEEELAENIVSPTEDSPLAPEEGNSLPPSSLECSKCCRKFSNTRQLRKHICIIVL
NLGEEEGEAGNESDLELEKKCKEDDREKASKRPRSQKTEKVQKISGKEARQLSGAKKPIISVVLTAHEAI
PGATKIVPVEAGPPETGATNSETTSADLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYCNKVF
KFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHIERVHK
KIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTREGKRQLLYDCHICERKFKNELDRD
RHMLVHGDKWPFACELCGHGATKYQALELHVRKHPFVYVCAVCRKKFVSSIRLRTHIKEVHGAAQEALVF
TSSINQSFCLLEPGGDIQQEALGDQLQLVEEEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAV
HLASPQAESTALPPCELETTVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQGEV
ITLLLSKAQSAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEASDLLPPVAGGGDTITHQPD
SCKAAPEHRSGITAFMKVLNSLQKKQMNTSLCERIRKVYGDLECEYCGKLFWYQVHFDMHVRTHTREHLY
YCSQCHYSSITKNCLKRHVIQKHSNILLKCPTDGCDYSTPDKYKLQAHLKVHTALDKRSYSCPVCEKSFS
EDRLIKSHIKTNHPEVSMSTISEVLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFK
CSLCEYATRSKSNLKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTADGKQFKCTVCDYTAAQKPQ
LLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGTGELAAEVLIQQGGLKCPVCSFVY
GTKWEFNRHLKNKHGLKVVEIDGDPKWETATEAPEEPSTQYLHITEAEEDVQGTQAAVAALQDLRYTSES
GDRLDPTAVNILQQIIELGAETHDATALASVVAMAPGTVTVVKQVTEEEPSSNHTVMIQETVQQASVELA
EQHHLVVSSDDVEGIETVTVYTQGGEASEFIVYVQEAMQPVEEQAVEQPAQEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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