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Report for CCDS4780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4780.1 Public Homo sapiens 6 ZBTB9 24 110 108 CCDS HistoryNCBI Gene:221504Re-query CCDS DB by CCDS ID:4780.1Re-query CCDS DB by GeneID:221504See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395064.3 ENSP00000378503.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395064.3Link to Ensembl Protein Viewer:ENSP00000378503.2Re-query CCDS DB by Nucleotide ID:ENST00000395064Re-query CCDS DB by Protein ID:ENSP00000378503
Original member Current member NCBI NM_152735.4 NP_689948.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152735.4Link to Protein Sequence:NP_689948.1Re-query CCDS DB by Nucleotide ID:NM_152735Re-query CCDS DB by Protein ID:NP_689948Link to BLAST:NP_689948.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689948.1 473 Q96C00 473 100% 0 0

Chromosomal Locations for CCDS 4780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 33455101 33456522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1422 nt):
ATGGAAACCCCAACACCTTTGCCGCCTGTACCCGCCTCCCCGACCTGCAACCCAGCCCCACGGACAATCC
AGATCGAGTTCCCACAGCATAGCTCGTCTCTGCTGGAATCTCTGAACCGCCACAGGCTAGAGGGAAAGTT
CTGTGATGTGTCCCTCCTGGTGCAGGGCCGGGAACTTAGGGCTCATAAAGCAGTGTTAGCTGCTGCCTCT
CCTTACTTCCATGACAAGCTGCTTCTGGGGGATGCGCCTCGTCTCACTCTACCGAGTGTCATTGAAGCCG
ATGCCTTCGAGGGGCTGCTCCAGCTCATTTATTCAGGGCGTCTCCGCCTGCCACTGGATGCTCTTCCTGC
TCATCTCCTTGTGGCCAGTGGCCTTCAAATGTGGCAGGTAGTAGATCAGTGCTCAGAAATTCTTAGAGAA
TTAGAAACTTCAGGTGGTGGAATTTCAGCCCGTGGAGGAAACTCCTACCATGCCCTTCTTTCCACTACAT
CCTCTACAGGAGGCTGGTGCATTCGCTCTTCGCCTTTCCAGACCCCAGTACAGTCCTCTGCTTCTACTGA
AAGCCCTGCTTCCACTGAGAGCCCTGTGGGAGGGGAGGGAAGTGAACTGGGAGAAGTGCTGCAAATTCAG
GTGGAAGAAGAAGAGGAGGAGGAGGAAGATGATGATGATGAGGACCAGGGGTCAGCCACACTCTCTCAGA
CTCCTCAGCCCCAGAGAGTATCAGGGGTTTTTCCCCGTCCTCATGGACCCCACCCACTGCCCATGACTGC
TACTCCCCGAAAGCTTCCAGAGGGTGAGAGTGCACCACTTGAGCTTCCTGCCCCTCCTGCACTGCCCCCC
AAAATCTTCTACATTAAGCAGGAACCCTTCGAGCCTAAGGAGGAGATATCAGGAAGCGGAACTCAGCCTG
GAGGAGCAAAGGAGGAAACCAAAGTGTTTTCTGGAGGGGACACTGAAGGGAATGGGGAGCTAGGGTTCTT
GTTGCCTTCAGGGCCAGGGCCAACATCTGGGGGAGGGGGTCCATCCTGGAAACCAGTGGATCTTCATGGG
AATGAAATCCTGTCAGGGGGTGGAGGACCTGGGGGAGCAGGCCAGGCCGTGCATGGGCCTGTGAAGCTAG
GGGGGACACCCCCTGCAGATGGAAAACGCTTTGGTTGCCTGTGTGGGAAGCGGTTTGCAGTGAAGCCAAA
GCGTGACCGGCACATCATGCTGACCTTCAGCCTTCGGCCTTTTGGCTGTGGCATCTGCAACAAGCGCTTC
AAGCTGAAGCACCATCTGACAGAGCACATGAAGACCCATGCTGGAGCCCTGCATGCCTGTCCCCACTGTG
GCCGTCGGTTCCGAGTCCATGCCTGTTTTCTCCGCCACCGGGACCTATGCAAGGGCCAGGGCTGGGCCAC
TGCCCACTGGACTTACAAGTGA

Translation (473 aa):
METPTPLPPVPASPTCNPAPRTIQIEFPQHSSSLLESLNRHRLEGKFCDVSLLVQGRELRAHKAVLAAAS
PYFHDKLLLGDAPRLTLPSVIEADAFEGLLQLIYSGRLRLPLDALPAHLLVASGLQMWQVVDQCSEILRE
LETSGGGISARGGNSYHALLSTTSSTGGWCIRSSPFQTPVQSSASTESPASTESPVGGEGSELGEVLQIQ
VEEEEEEEEDDDDEDQGSATLSQTPQPQRVSGVFPRPHGPHPLPMTATPRKLPEGESAPLELPAPPALPP
KIFYIKQEPFEPKEEISGSGTQPGGAKEETKVFSGGDTEGNGELGFLLPSGPGPTSGGGGPSWKPVDLHG
NEILSGGGGPGGAGQAVHGPVKLGGTPPADGKRFGCLCGKRFAVKPKRDRHIMLTFSLRPFGCGICNKRF
KLKHHLTEHMKTHAGALHACPHCGRRFRVHACFLRHRDLCKGQGWATAHWTYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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