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Report for CCDS47757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47757.1 Public Homo sapiens 7 DYNC2I1 24 110 108 CCDS HistoryNCBI Gene:55112Re-query CCDS DB by CCDS ID:47757.1Re-query CCDS DB by GeneID:55112See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47757.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407559.8 ENSP00000384290.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407559.8Link to Ensembl Protein Viewer:ENSP00000384290.3Re-query CCDS DB by Nucleotide ID:ENST00000407559Re-query CCDS DB by Protein ID:ENSP00000384290
Original member Current member NCBI NM_018051.5 NP_060521.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018051.5Link to Protein Sequence:NP_060521.4Re-query CCDS DB by Nucleotide ID:NM_018051Re-query CCDS DB by Protein ID:NP_060521Link to BLAST:NP_060521.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060521.4 1066 Q8WVS4 1066 100% 0 0

Chromosomal Locations for CCDS 47757.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 158856736 158856750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158869855 158869908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158871142 158871562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158876609 158876691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158879684 158879989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158884564 158884619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158887021 158887075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158891265 158891333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158901739 158901816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158902376 158902595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158905989 158906091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158911550 158911679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158912985 158913096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158914233 158914321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158918740 158918869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158922377 158922549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158923571 158923733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158926187 158926300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158926402 158926463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158926992 158927043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158930455 158930515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158934129 158934228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158934418 158934549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158941925 158942148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 158945581 158945779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3201 nt):
ATGGAGCCCGGGAAGAGAAGAACCAAAGATGATACCTGGAAAGCAGATGACCTCAGAAAACATCTCTGGG
CCATACAGTCAGGTGGTTCCAAGGAAGAAAGAAAGCACAGAGAGAAGAAGCTGCGTAAGGAGTCTGAGAT
GGACCTTCCTGAACATAAGGAGCCGAGGTGCAGGGATCCCGACCAGGATGCCAGGAGCAGAGACAGGGTG
GCCGAAGTCCACACCGCTAAGGAGAGTCCTCGTGGGGAGAGGGACAGAGACAGACAGAGGGAGAGGAGAA
GAGACGCAAAAGACCGGGAGAAAGAAAAGCTGAAGGAGAAACATCGAGAGGCAGAAAAGTCTCACAGCAG
AGGAAAGGACAGGGAAAAAGAAAAAGACAGAAGGGCCCGGAAGGAAGAGCTCCGGCAGACCGTGGCCCAC
CACAACCTGCTGGGCCAGGAGACACGCGACCGGCAGCTCCTGGAGCGGGCGGAGAGGAAAGGCCGCTCAG
TAAGTAAAGTAAGAAGTGAAGAGAAAGATGAAGACTCTGAAAGAGGAGATGAAGATAGAGAAAGAAGATA
CCGAGAAAGAAAGCTGCAGTACGGAGACAGCAAGGACAACCCTCTCAAGTACTGGCTTTATAAAGAAGAA
GGCGAGAGGAGACACAGGAAGCCCAGAGAGCCAGATCGAGACAACAAACACCGAGAAAAAAGCAGCACAA
GGGAAAAAAGAGAGAAATATTCCAAAGAGAAAAGTAATTCATTCTCTGACAAAGGGGAAGAAAGACATAA
AGAAAAGCGACACAAAGAAGGTTTTCATTTTGATGATGAGAGGCACCAAAGCAACGTGGATAGAAAAGAG
AAATCGGCAAAAGATGAGCCCAGGAAAAGGGAATCCCAGAATGGTGAACACAGAAATCGAGGTGCAAGCT
CAAAAAGAGATGGGACCAGCAGCCAGCATGCTGAGAATTTAGTAAGGAATCATGGAAAAGATAAAGATTC
AAGACGGAAGCATGGCCACGAGGAAGGCTCTTCTGTGTGGTGGAAGCTGGACCAGAGGCCGGGAGGCGAG
GAAACCGTGGAAATTGAAAAGGAAGAAACTGATTTAGAAAATGCTAGAGCTGATGCATATACAGCCAGTT
GTGAAGATGATTTTGAAGACTATGAAGATGACTTTGAGGTTTGTGATGGTGATGATGATGAAAGCAGTAA
TGAACCTGAGTCAAGAGAAAAACTGGAAGAACTTCCTCTAGCTCAAAAAAAGGAAATACAAGAAATTCAA
AGAGCTATTAATGCAGAAAATGAAAGGATTGGCGAGTTATCTTTGAAACTGTTTCAGAAGCGAGGTAGAA
CAGAATTTGAAAAGGAGCCCAGGACAGATACAAACAGTTCCCCTTCCAGAGCCTCTGTTTGTGGAATTTT
TGTGGATTTTGCCTCAGCTTCACACCGTCAAAAGAGTCGGACTCAGGCCCTTAAGCAAAAGATGCGAAGT
ACAAAACTGCTTCGGCTCATTGACTTAGATTTTTCATTTACTTTCTCTCTCTTGGATCTACCACCAGTAA
ATGAATATGACATGTATATCAGAAACTTTGGGAAAAAAAATACCAAGCAGGCATATGTTCAGTGTAACGA
AGATAATGTTGAAAGAGACATTCAAACGGAGGAAATAGAGACCAGGGAAGTGTGGACCCAGCACCCGGGA
GAAAGTACTGTTGTATCTGGAGGCAGTGAACAAAGAGATACCTCTGATGCTGTAGTTATGCCAAAGATTG
ATACTCCAAGGTTATGTAGCTTTCTGCGGGCTGCTTGTCAGGTGATGGCCGTTTTGCTGGAAGAGGATCG
CTTGGCAGCTGAACCCAGCTGGAATCTTAGGGCTCAAGACAGGGCCCTGTATTTTAGTGACAGCTCATCT
CAGCTGAACACCAGTCTACCATTCCTTCAAAATCGAAAAGTATCCTCCTTGCACACCTCCCGAGTTCAGA
GGCAGATGGTGGTCTCCGTTCACGACTTACCCGAGAAGAGCTTTGTGCCCCTGCTGGACAGCAAATACGT
CCTCTGTGTGTGGGATATTTGGCAGCCTTCAGGGCCACAGAAAGTTCTGATATGTGAGTCCCAGGTCACG
TGTTGCTGCTTGAGCCCTTTGAAAGCATTTTTACTGTTTGCCGGAACAGCGCACGGCTCAGTTGTCGTCT
GGGATTTGAGAGAAGACTCAAGGCTGCATTACTCTGTGACGCTGAGCGATGGCTTCTGGACGTTCCGGAC
CGCCACGTTTTCCACCGATGGAATCCTTACCTCAGTAAACCACCGAAGCCCTCTTCAAGCAGTAGAACCT
ATCTCAACGTCCGTCCACAAAAAGCAGAGCTTTGTGCTTTCACCCTTTTCTACTCAAGAAGAAATGTCAG
GTTTGTCCTTCCACATCGCTTCCTTGGATGAGAGTGGGGTTCTCAATGTATGGGTGGTTGTTGAATTACC
AAAGGCAGACATCGCAGGTTCAATAAGTGATTTAGGTCTGATGCCTGGAGGGAGGGTCAAGCTGGTACAT
AGTGCTCTGATCCAGTTGGGTGACAGTCTTTCCCATAAAGGTAATGAATTTTGGGGCACTACACAAACAC
TGAATGTTAAATTTCTGCCTTCAGATCCTAATCACTTTATTATTGGCACAGACATGGGTCTCATAAGCCA
TGGCACAAGACAAGATTTGAGAGTGGCTCCCAAACTATTCAAACCTCAGCAACATGGTATAAGACCAGTG
AAAGTTAATGTCATTGATTTTTCACCATTTGGAGAACCAATATTTTTGGCCGGCTGTTCGGACGGAAGCA
TCAGGCTGCACCAGCTGAGCTCCGCGTTTCCGCTCCTGCAGTGGGACAGCAGCACGGACAGCCATGCGGT
CACCGGCCTGCAGTGGTCCCCAACCAGGCCTGCCGTGTTCCTGGTGCAGGACGACACATCCAACATCTAC
ATCTGGGACCTCCTCCAGAGCGATCTGGGTCCTGTCGCCAAACAGCAGGTCTCCCCCAACAGGCTGGTGG
CCATGGCTGCGGTGGGTGAGCCTGAGAAGGCTGGTGGCAGCTTCCTGGCCCTGGTGCTGGCCAGGGCGTC
TGGCTCCATCGACATCCAGCACCTGAAGAGGCGGTGGGCGGCCCCGGAGGTGGACGAGTGCAACAGGCTG
CGTCTGCTTTTGCAGGAAGCCCTGTGGCCAGAGGGAAAACTGCACAAGTAG

Translation (1066 aa):
MEPGKRRTKDDTWKADDLRKHLWAIQSGGSKEERKHREKKLRKESEMDLPEHKEPRCRDPDQDARSRDRV
AEVHTAKESPRGERDRDRQRERRRDAKDREKEKLKEKHREAEKSHSRGKDREKEKDRRARKEELRQTVAH
HNLLGQETRDRQLLERAERKGRSVSKVRSEEKDEDSERGDEDRERRYRERKLQYGDSKDNPLKYWLYKEE
GERRHRKPREPDRDNKHREKSSTREKREKYSKEKSNSFSDKGEERHKEKRHKEGFHFDDERHQSNVDRKE
KSAKDEPRKRESQNGEHRNRGASSKRDGTSSQHAENLVRNHGKDKDSRRKHGHEEGSSVWWKLDQRPGGE
ETVEIEKEETDLENARADAYTASCEDDFEDYEDDFEVCDGDDDESSNEPESREKLEELPLAQKKEIQEIQ
RAINAENERIGELSLKLFQKRGRTEFEKEPRTDTNSSPSRASVCGIFVDFASASHRQKSRTQALKQKMRS
TKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQCNEDNVERDIQTEEIETREVWTQHPG
ESTVVSGGSEQRDTSDAVVMPKIDTPRLCSFLRAACQVMAVLLEEDRLAAEPSWNLRAQDRALYFSDSSS
QLNTSLPFLQNRKVSSLHTSRVQRQMVVSVHDLPEKSFVPLLDSKYVLCVWDIWQPSGPQKVLICESQVT
CCCLSPLKAFLLFAGTAHGSVVVWDLREDSRLHYSVTLSDGFWTFRTATFSTDGILTSVNHRSPLQAVEP
ISTSVHKKQSFVLSPFSTQEEMSGLSFHIASLDESGVLNVWVVVELPKADIAGSISDLGLMPGGRVKLVH
SALIQLGDSLSHKGNEFWGTTQTLNVKFLPSDPNHFIIGTDMGLISHGTRQDLRVAPKLFKPQQHGIRPV
KVNVIDFSPFGEPIFLAGCSDGSIRLHQLSSAFPLLQWDSSTDSHAVTGLQWSPTRPAVFLVQDDTSNIY
IWDLLQSDLGPVAKQQVSPNRLVAMAAVGEPEKAGGSFLALVLARASGSIDIQHLKRRWAAPEVDECNRL
RLLLQEALWPEGKLHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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